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The map label for this gene is yuaQ [H]

Identifier: 82544374

GI number: 82544374

Start: 1881107

End: 1882243

Strand: Reverse

Name: yuaQ [H]

Synonym: SBO_1900

Alternate gene names: 82544374

Gene position: 1882243-1881107 (Counterclockwise)

Preceding gene: 82544375

Following gene: 82544373

Centisome position: 41.64

GC content: 46.97

Gene sequence:

>1137_bases
TTGGAGTCATTACCTAATGTTCTGGTTAATAATACTGGAGGTGACTTAAACATAATTTCGTCCGACTCTATTCTAAATGG
AGCGACTAAACTCGTTAGCGGCACAACCACGCTGAAGCTTTCAGAAAATACAATCTGGAATATGAAAGATGACTCCGTTG
TTACCCATCTGACTAATTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTA
ACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCGGCTACGGA
CAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGC
TAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAGAAGCCTTCAGACAAGGTGATGCAAGGATTGCA
GCTGGAGCTTTCGAATATCAACTAAAACAACAAGGCAAAAACTGGTATTTGACAAGTTATCAGTCAGTGAATGAGGAGGA
TAACAGCTCAGAGGGAAATTCAGAACCAACAGAAACGCCTACCCCCGTCCTGCGCCCCGAAGCTGGAAGTTACGTCGCCA
ACCTGGCAGCCGCTAACACTCTTTTTGTTATGCGTCTGAACGACCGTGCGGGTGAAATGCGCTACATCGATCCTGTAACT
GAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAG
AACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGCCGATCTGTTAACCGGTGGTTTTACCGACAGTGACAGTTGGCGTT
TGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTCAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTC
AGAGGCTATTGCGCAGGGCTGTATGCCACTTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACATTGACGCCTGGGC
GCAATATAGCTGGTTTAAAAACTCGGTGAAAGGGGATGAATTAGCCTATGAATCCTATAGTGCGAAAGGCGCAACCGTCT
CGCTGGAAGCGGGTTAG

Upstream 100 bases:

>100_bases
CTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAA
CATAAAACACTATCAGTAAG

Downstream 100 bases:

>100_bases
GGCTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATACACGTGGATATTCCAGCCACAGGCACAGGCTATCTG
GATGGGCGTCGATCATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MESLPNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTL
TVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIA
AGAFEYQLKQQGKNWYLTSYQSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAG

Sequences:

>Translated_378_residues
MESLPNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTL
TVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIA
AGAFEYQLKQQGKNWYLTSYQSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAG
>Mature_378_residues
MESLPNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTL
TVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIA
AGAFEYQLKQQGKNWYLTSYQSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSV
RGYCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAG

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1788565, Length=389, Percent_Identity=31.6195372750643, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 40963; Mature: 40963

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLPNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNS
CCCCCCEEEECCCCCEEEEECCCHHCCHHHHCCCCEEEEEECCEEECCCCCCEEEEEECC
DSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTT
CCEEEEEECCCCEEECCCEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCEE
VYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIAAGAFEYQLKQQGKNWYLTSY
EEEECCCCCCCEEECCEEEEEECCCCCHHHHHHCCCCEEEECHHHHHHHHCCCCEEEEEC
QSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCEEEECCCC
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGY
HHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEC
ARDYNSTHSSVSDYRSKGSVRGYCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDE
CCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCC
LAYESYSAKGATVSLEAG
EEECCCCCCCCEEEEECC
>Mature Secondary Structure
MESLPNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNS
CCCCCCEEEECCCCCEEEEECCCHHCCHHHHCCCCEEEEEECCEEECCCCCCEEEEEECC
DSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTT
CCEEEEEECCCCEEECCCEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCEE
VYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIAAGAFEYQLKQQGKNWYLTSY
EEEECCCCCCCEEECCEEEEEECCCCCHHHHHHCCCCEEEECHHHHHHHHCCCCEEEEEC
QSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCEEEECCCC
EQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGY
HHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEC
ARDYNSTHSSVSDYRSKGSVRGYCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDE
CCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCC
LAYESYSAKGATVSLEAG
EEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA