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The map label for this gene is insF1 [C]

Identifier: 82544345

GI number: 82544345

Start: 1850182

End: 1850490

Strand: Reverse

Name: insF1 [C]

Synonym: SBO_1867

Alternate gene names: 82544345

Gene position: 1850490-1850182 (Counterclockwise)

Preceding gene: 82544346

Following gene: 82544344

Centisome position: 40.94

GC content: 46.93

Gene sequence:

>309_bases
TTGTTGACCACTTCAGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTGAAAAC
ATCAATGTCGCGTAAAGGTCACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCCTGA
GCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAGCGT
CGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATAGCTGCTTAA

Upstream 100 bases:

>100_bases
GATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTCCCCCCAAACGAATCGGAAAATCGATACTGGAAAAAC
TCTAACTCGGTGGCCAGTTT

Downstream 100 bases:

>100_bases
AAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCATTCACATAGACATTCAGCTGGCTGTTGCCTGCGGTGA
TGTCATACCCCAGTATCATG

Product: IS600 ORF2

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLTTSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQR
RHSRLGNISPAAFREKYHQIAA

Sequences:

>Translated_102_residues
MLTTSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQR
RHSRLGNISPAAFREKYHQIAA
>Mature_102_residues
MLTTSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQR
RHSRLGNISPAAFREKYHQIAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=96, Percent_Identity=43.75, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1787263, Length=96, Percent_Identity=43.75, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1786753, Length=96, Percent_Identity=43.75, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1786570, Length=96, Percent_Identity=43.75, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1786490, Length=96, Percent_Identity=43.75, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1789981, Length=90, Percent_Identity=43.3333333333333, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12063; Mature: 12063

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNN
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
RDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLTTSDRGSQYCAYDYRVIQEQSGLKTSMSRKGHCYDNAPMESFWGTLKNESLSHYRFNN
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
RDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]