Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ychG [H]

Identifier: 82544310

GI number: 82544310

Start: 1808826

End: 1809365

Strand: Direct

Name: ychG [H]

Synonym: SBO_1830

Alternate gene names: 82544310

Gene position: 1808826-1809365 (Clockwise)

Preceding gene: 82544309

Following gene: 82544312

Centisome position: 40.02

GC content: 54.44

Gene sequence:

>540_bases
ATGGCTCTTCCGCCAGACCGCACAGACAGGGGCGCGGAACGTTACCTGAAGGATGACTGGCACGGCCTGCAACTTTTTGC
CATTGATGGCGCACAGTTCAGGACACCTGATAAACCCGAGCTGCGTGAATATTATGGGTCTGCCAACACATCCACTAAGC
GGCAGAACGCCTACCCGGTTATGCGTCTGGTGGCCTTAATGAACCTGGGAAGTCACATTCTGCTGAATGCCGTGACCGCA
CCTTACCGGCAGAGCGAAACTGTGCTGGCCCACTCCATGCTCGCCACCATCCCGGATAACTCTATTACGTTGTTTGATAA
GCTTTTTTACAGCGAAGACCTGCTGCTAACGCTGAACCAGAAGGGTTGTAACCGCCACTGGCTACTGCCTGCGTGGAAGG
AATATCGCATCAGAAATGATAGAGCTGGGAAACACGGCGTCACCAGGGACCATCCCGAAACGACTGGAGCATCTTCGGGG
TGCTCTGGAAGTGGTGTTCATAACAAAACGCCCCCGACCATCAAGGCCGAGGTCGGTTAA

Upstream 100 bases:

>100_bases
GCCGTCTGAACCTGAGCGCGGATGGCGAAGCGGGGATGAACCTGCTGGCCCGCAGCGCTGTCACCCAAGCGCGTCAGCGC
GTGGGGGCCGCCCCAGTGGA

Downstream 100 bases:

>100_bases
GATATCAAAAACCCGTTATCCTGTGAAACATAGTGCCGCTCCTCTTAAGTGAACGGCATTGCCCTTCTGGGGCCGTATTT
TTTGTTTACCCAAAGCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MALPPDRTDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTA
PYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKEYRIRNDRAGKHGVTRDHPETTGASSG
CSGSGVHNKTPPTIKAEVG

Sequences:

>Translated_179_residues
MALPPDRTDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTA
PYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKEYRIRNDRAGKHGVTRDHPETTGASSG
CSGSGVHNKTPPTIKAEVG
>Mature_178_residues
ALPPDRTDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTAP
YRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKEYRIRNDRAGKHGVTRDHPETTGASSGC
SGSGVHNKTPPTIKAEVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790729, Length=131, Percent_Identity=38.1679389312977, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 20035; Mature: 19904

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPPDRTDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPV
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHH
MRLVALMNLGSHILLNAVTAPYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQ
HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCEEEEECC
KGCNRHWLLPAWKEYRIRNDRAGKHGVTRDHPETTGASSGCSGSGVHNKTPPTIKAEVG
CCCCCEECCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
ALPPDRTDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPV
CCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHH
MRLVALMNLGSHILLNAVTAPYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQ
HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCEEEEECC
KGCNRHWLLPAWKEYRIRNDRAGKHGVTRDHPETTGASSGCSGSGVHNKTPPTIKAEVG
CCCCCEECCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773397; 8905232; 9097039; 9278503 [H]