| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is puuA [H]
Identifier: 82544246
GI number: 82544246
Start: 1741336
End: 1742832
Strand: Direct
Name: puuA [H]
Synonym: SBO_1765
Alternate gene names: 82544246
Gene position: 1741336-1742832 (Clockwise)
Preceding gene: 161984928
Following gene: 82544247
Centisome position: 38.53
GC content: 52.44
Gene sequence:
>1497_bases TTGCATACAGATTCGAATGGTGGTCATTATATTTTACGCTTTGATAACGAGCGGAAAACAAACCAAAGGCGAAGAATCAT GGAAACCAATATCGTTGAAGTAGAGAACTTTGTTCAGCAGCCAGAAGAGAGGCGGGGTAGCGCCTTTACGCAGGAAGTGA AACGCTACCTGGAGCGCTACCCGAATACGCAATATGTTGATGTTTTACTTACTGATTTGAATGGTTGCTTCCGTGGAAAA CGTATCCCTGTTTCAAGCCTGAAGAAGTTGGAGAAAGGGTGTTATTTCCCGGCCTCGGTGTTTGCAATGGATATTCTGGG CAACGTAGTAGAAGAAGCGGGTCTGGGTCAGGAAATGGGCGAGCCGGATCGTACTTGTGTTCCTGTTCTCGGTTCCTTAA CCCCTTCTGCCGCCGATCCAGAGTTTATCGGTCAGATGCTCCTGACCATGGTCGATGAAGATGGCGCTCCCTTTGACGTT GAGCCGCGGAACGTTCTTAACCGCCTGTGGCAGCAGCTACGCCAGCGCGGATTGTTCCCGGTTGTAGCGGTAGAGCTGGA GTTCTATTTACTGGATCGTCAGCGCGACGCTGAAGGGTATCTGCAACCGCCCTGCGCGCCCGGCACCGATAACCGCAATA CACAAAGCCAGGTTTACTCCGTTGATAACCTCAACCACTTCGCCGACGTGCTCAATGATATTGATGAACTGGCGCAGTTA CAGTTAATTCCCGCCGACGGTGCGGTCGCCGAAGCCTCGCCGGGTCAGTTTGAAATCAACCTTTACCATACCGATAACGT GCTGGAAGCCTGCGATGATGCGCTGGCGCTAAAACTCCTGGTGCGTCTGATGGCAGAAAAGCATAAGATGCACTCCACTT TTATGGCGAAGCCGTATGAAGAGCACGCGGGCAGCGGGATGCATATCCATATCAGTATGCAAAATAATCGTGGCGAGAAT GTGCTTTCTGACACAGAAGGCGAAGATTCGCCGCTGCTGAAAAAGATGCTCGCCGGGATGATTGACCTGATGCCGTCGTC GATGGCGTTGCTGGCACCAAACGTGAACTCGTATCGCCGCTTCCAGCCGGGAATGTATGTGCCGACGCAGGCGTCGTGGG GCCATAACAACCGCACCGTCGCCCTGCGTATTCCGTGCGGCGACCGTCATAATCACCGCGTGGAATATCGCGTGGCGGGT GCCGATGCCAACCCATATCTGGTGATGGCAGCGATTTTTGCCGGTATTTTGCATGGCCTTGATAACGAGCTGCCGTTGCA GGAAGAAGTCGAAGGCAACGGGCTGGAACAGGAAGGCTTACCCTTCCCGATTCGCCAGAGCGATGCCCTGGGTGAGTTTA TCGAGAATGATCACCTGCGCCGCTATTTAGGCGAACGGTTTTGCCATGTGTATCACGCCTGTAAAAATGATGAGCTGTTG CAGTTTGAGCGCCTCATCACAGAAACAGAAATTGAGTGGATGTTGAAAAACGCATAG
Upstream 100 bases:
>100_bases ATTACTGCGCTTTAAATGACCTTTATGTTCAATATTTTTTCAATCTAGCAGTGGGTTTTCATTTTTGCAAACTAAATTTA ACATTTGGCAAACATTTAGT
Downstream 100 bases:
>100_bases TACCCCTTGCGGGGTTGTTTCATCGACCTGAGCGGAGCCAGGCCTGACATTTGCTGGTAATCCAGACATTTCCCGGATGT CGCGTTATGGAGCGCAGGCG
Product: glutamine synthetase
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MHTDSNGGHYILRFDNERKTNQRRRIMETNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGK RIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDV EPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQL QLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEHAGSGMHIHISMQNNRGEN VLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAG ADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELL QFERLITETEIEWMLKNA
Sequences:
>Translated_498_residues MHTDSNGGHYILRFDNERKTNQRRRIMETNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGK RIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDV EPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQL QLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEHAGSGMHIHISMQNNRGEN VLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAG ADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELL QFERLITETEIEWMLKNA >Mature_498_residues MHTDSNGGHYILRFDNERKTNQRRRIMETNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGK RIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDV EPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQL QLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEHAGSGMHIHISMQNNRGEN VLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAG ADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELL QFERLITETEIEWMLKNA
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=440, Percent_Identity=25.4545454545455, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI87081870, Length=472, Percent_Identity=98.9406779661017, Blast_Score=970, Evalue=0.0, Organism=Escherichia coli, GI1790301, Length=398, Percent_Identity=25.1256281407035, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 56388; Mature: 56388
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDSNGGHYILRFDNERKTNQRRRIMETNIVEVENFVQQPEERRGSAFTQEVKRYLERY CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHC PNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMG CCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC EPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFP CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCE VVAVELEFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQL EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHE QLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYE EEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR HHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHH FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC DNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELL CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QFERLITETEIEWMLKNA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHTDSNGGHYILRFDNERKTNQRRRIMETNIVEVENFVQQPEERRGSAFTQEVKRYLERY CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHC PNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMG CCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC EPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFP CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCE VVAVELEFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQL EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHE QLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYE EEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR HHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHH FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC DNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELL CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QFERLITETEIEWMLKNA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]