Click here to switch to the map view.

The map label for this gene is ydbL [H]

Identifier: 82544169

GI number: 82544169

Start: 1666658

End: 1667005

Strand: Reverse

Name: ydbL [H]

Synonym: SBO_1683

Alternate gene names: 82544169

Gene position: 1667005-1666658 (Counterclockwise)

Preceding gene: 82544170

Following gene: 82544167

Centisome position: 36.88

GC content: 44.83

Gene sequence:

>348_bases
ATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGA
AGCCAGAACGCAGGGGCGGGTCGGGGAAACATTTTATGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAAT
TAGTAACCGACATTAATGCCGAACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCTGTAGATGATATC
GCGAAACTCGCCGGGCAAAAGCTCGTAGCTCGGGCCAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTACG
AAAATTGGTAATGACTCCAACTTACTGA

Upstream 100 bases:

>100_bases
ACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCG
TAGCGATCTTTACTGAGGCG

Downstream 100 bases:

>100_bases
TAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCC
CAGCCTTGCCAGATGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKLVMTPTY

Sequences:

>Translated_115_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKLVMTPTY
>Mature_115_residues
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDI
AKLAGQKLVARAKPGEYVQGINGKWVRKLVMTPTY

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=108, Percent_Identity=98.1481481481482, Blast_Score=216, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008309 [H]

Pfam domain/function: PF07027 DUF1318 [H]

EC number: NA

Molecular weight: Translated: 12698; Mature: 12698

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINA
CCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHCCC
ERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKLVMTPTY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINA
CCHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHCCC
ERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKLVMTPTY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]