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The map label for this gene is ynbC [H]

Identifier: 82544163

GI number: 82544163

Start: 1662978

End: 1664330

Strand: Reverse

Name: ynbC [H]

Synonym: SBO_1677

Alternate gene names: 82544163

Gene position: 1664330-1662978 (Counterclockwise)

Preceding gene: 82544164

Following gene: 82544162

Centisome position: 36.82

GC content: 50.11

Gene sequence:

>1353_bases
GTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGTCTGCG
TGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGTGGCGAGTTTCAATAATG
ATCCGCTGATCACACGGGCGATTGCCGTCAATATCTTGCTCGATCTCTATAAAACGTCTGAACGTATTATTAGAGATGCG
GCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGTGATGACTATGTGGTGCATCGCCAACCGCAGATTGATTTTTA
TCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAACAGGG
CGCTGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAA
GACTGCACAGGACCATCAGCGGATCAATGGCGGCTACTTTCTGGTGGACCCGTGCTATTATCGCCGGTTGATTTAGCGTA
TCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTGCGGGCCTGCATCTCGGAATGAGCACCGGCTTTGATT
CAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGCTTAATCGACAAAATCTAC
CTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCT
CCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGCAAACG
AGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCCCAACGG
GGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGGCCTAC
GCTGGCAATTGTCTCTGGACTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGCCAATG
CCATCGAACCGGTCGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCTCAACTGGAGATGATTGCCGGGGTGTTAACC
AGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCCGGATT
TGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA

Upstream 100 bases:

>100_bases
CTAGGTTGGACTGGAAGAGGTGGTTGTGATCGCGCAAAGCGTCGGCGCAGTGCTGGTTGCCACATAGGTTCATGATTATG
CGCCTGCAATTCGCGGGCTG

Downstream 100 bases:

>100_bases
ACGTCGGAACGTATTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTTTTCTTCACCTATGGATCTCTTA
ATCAGTTCACCGCGGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIIRDA
AAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHE
DCTGPSADQWRLLSGGPVLLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIY
LNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQR
GMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPVGILIYTGQPWHPQLEMIAGVLT
SHKDGKPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN

Sequences:

>Translated_450_residues
MLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIIRDA
AAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHE
DCTGPSADQWRLLSGGPVLLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIY
LNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQR
GMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPVGILIYTGQPWHPQLEMIAGVLT
SHKDGKPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN
>Mature_450_residues
MLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIIRDA
AAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHE
DCTGPSADQWRLLSGGPVLLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIY
LNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQR
GMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPVGILIYTGQPWHPQLEMIAGVLT
SHKDGKPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=450, Percent_Identity=98.4444444444444, Blast_Score=913, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 50623; Mature: 50623

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRA
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
IAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLL
HHHHHHHHHHHHHHHHHHHHHHHEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHC
PGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHEDCTGPSADQWRLLSGGPVLL
CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
SPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIY
CHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
LNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCCCCHHHH
LLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPE
HHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC
NEQVKNSLAGLANAIEPVGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDS
CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH
LVRDAGFDKCTQRIDEWGIFTVSMAVRRDN
HHHHCCHHHHHHHHHHCCEEEEEEEEECCC
>Mature Secondary Structure
MLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRA
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
IAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLL
HHHHHHHHHHHHHHHHHHHHHHHEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHC
PGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHEDCTGPSADQWRLLSGGPVLL
CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
SPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIY
CHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
LNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCCCCHHHH
LLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPE
HHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC
NEQVKNSLAGLANAIEPVGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDS
CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH
LVRDAGFDKCTQRIDEWGIFTVSMAVRRDN
HHHHCCHHHHHHHHHHCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]