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The map label for this gene is hrpA [H]

Identifier: 82544160

GI number: 82544160

Start: 1656913

End: 1660758

Strand: Reverse

Name: hrpA [H]

Synonym: SBO_1674

Alternate gene names: 82544160

Gene position: 1660758-1656913 (Counterclockwise)

Preceding gene: 82544162

Following gene: 82544159

Centisome position: 36.74

GC content: 53.69

Gene sequence:

>3846_bases
ATGCTGCGCGACAGACTGCGTTTTTCTCGCCGTCTGCATGGTGTTAAGAAGGTTAAAAATCCTGATGCACAACAGGCCAT
TTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATCACTT
ATCCGGACAATTTGCCAGTTAGTCAGAAAAAACAGGATATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCC
GGGGAAACCGGTTCCGGTAAAACGACCCAGCTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGG
CCATACCCAGCCGCGTCGTCTGGCGGCAAGAACGGTGGCGAACCGTATTGCGGAAGAGCTGAAAACGGAGCCAGGCGGTT
GCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTG
GCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCACACGAACGCAGCCTGAATAT
CGATTTTCTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGGGACTATCG
ACCCGGAACGCTTTTCTCGCCACTTTAATAATGCGCCGATTATCGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGC
TATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAG
CCAGGAAAGCCCTGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATTCGCGATACCGCCGATGCGCTGAACAAGC
TGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAATAGCGAACAGAACCGCGTGTTCCAGTCGCAC
AGCGGGCGACGCATTGTGCTGGCGACCAACGTCGCGGAAACCTCGCTGACTGTACCGGGGATTAAATACGTTATCGACCC
CGGTACGGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAACCCATTTCACAGGCGTCTG
CCAATCAGCGTAAAGGCCGTTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCG
CGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGG
CGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAACTGG
GCGCGATCACCACGGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAACTGCCGGTCGAT
CCTCGTCTGGCGCGTATGGTGCTGGAAGCGCAGAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTC
CATTCAGGACCCGCGTGAGCGGCCGATGGACAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAAT
CCGACTTCCTCGCGTTTGTAAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCAAACGCCTTCCGTCGC
CTGTGTCGTACCGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAA
AGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACGGGTTTACTTTCCC
ATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGT
TTATTCAAAAAACCGCCGAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGCATTGCTGCGCG
TATCGACCCGGAATGGGTGGAGCCTGTCGCTCAGCATTTGATTAAACGTACCTACAGCGAACCGCACTGGGAACGGGCGC
AGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCCGCGCGCAAGGTCAACTACAGCCAG
ATCGATCCGGCGTTATGTCGTGAACTCTTTATTCGCCATGCGCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTT
CCGTGAAAACCTGAAACTGCGGGCCGAAGTGGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACG
AAACGCTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTAATCTCCGCTCGTCACTTCGATAGCTGGTGGAAAAAA
GTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAGAGCATGTTGATCAAAGAAGGGGCGGAAAAAATCAGCAAGCT
GGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCAGGCGCAGACGCGGACG
GTGTGACCGTACATATTCCGCTGCCGTTACTTAACCAGGTTGAGGAAAGCGGGTTTGAATGGCAGATCCCCGGTCTGCGC
CGCGAATTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTGCCTGCACCAAACTACGCCGA
AGCGTTTTTAGGCCGCGTCACACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCG
TTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATCACCTTCCGCGTGGTGGATGACAAA
AACAAGAAGCTAAAAGAAGGGCGCTCGCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTGTCCGC
GGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGTTACGAACAGAAGC
GTGGCAACTATAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAACGCGACAGCGTGGCGATCAAACTGTTTGATAACCCG
CTGGAGCAAAAACAGGCAATGTGGAATGGTCTTCGCCGTCTACTGCTGCTAAATATTCCCTCGCCGATCAAGTATTTACA
TGAAAAGTTACCGAACAAAGCCAAGCTGGGACTGTACTTCAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTA
TCTCCTGCGGTGTGGATCAACTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAG
AAAGTGCGTGCCGAACTGAACGACACGGTGGTAGATATTGCGAAGCAGGTCGAGCAAATTCTTACGGCAGTGTTCAATAT
CAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCACTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGTTGG
TATATCGCGGTTTTGTCACTGGTAACGGCTTCAAACGGCTGGGCGACACGCTGCGATATTTGCAGGCGATTGAAAAACGA
CTGGAAAAACTGGCGGTTGATCCACATCGCGATCGTGCACAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCA
ATGGATCAACAAACTGCCGCCTGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGCTGCGCG
TTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGC
GGTTAA

Upstream 100 bases:

>100_bases
TTTAAAAGAAAATTAATCAGGCAGACTACTGCCCACTAACGTTATGACAGAACAACAAAAATTGACCTTTACTGCTTTGC
AGCAGCGGCTGGATTCGTTG

Downstream 100 bases:

>100_bases
CCCTGCTATTTGCCTAATAAATCTAAAACCCGGTAAGCATTTAGCGCCGGGTTTTTTATTAATTCTAAAACGGTAAGGGT
AAAAATTCAGGAATTCAGAA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1281; Mature: 1281

Protein sequence:

>1281_residues
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Sequences:

>Translated_1281_residues
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G
>Mature_1281_residues
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=638, Percent_Identity=37.4608150470219, Blast_Score=419, Evalue=1e-117,
Organism=Homo sapiens, GI68509926, Length=644, Percent_Identity=35.5590062111801, Blast_Score=406, Evalue=1e-113,
Organism=Homo sapiens, GI256000749, Length=649, Percent_Identity=35.1309707241911, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI255982614, Length=646, Percent_Identity=35.2941176470588, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI20544129, Length=653, Percent_Identity=34.6094946401225, Blast_Score=386, Evalue=1e-107,
Organism=Homo sapiens, GI20336302, Length=644, Percent_Identity=34.1614906832298, Blast_Score=383, Evalue=1e-106,
Organism=Homo sapiens, GI17999539, Length=684, Percent_Identity=35.3801169590643, Blast_Score=381, Evalue=1e-105,
Organism=Homo sapiens, GI38158022, Length=553, Percent_Identity=35.8047016274864, Blast_Score=354, Evalue=3e-97,
Organism=Homo sapiens, GI299829255, Length=605, Percent_Identity=34.0495867768595, Blast_Score=351, Evalue=3e-96,
Organism=Homo sapiens, GI261878478, Length=649, Percent_Identity=32.9738058551618, Blast_Score=344, Evalue=3e-94,
Organism=Homo sapiens, GI20336290, Length=514, Percent_Identity=34.6303501945525, Blast_Score=260, Evalue=7e-69,
Organism=Homo sapiens, GI167830433, Length=566, Percent_Identity=31.4487632508834, Blast_Score=259, Evalue=1e-68,
Organism=Homo sapiens, GI20336294, Length=514, Percent_Identity=34.6303501945525, Blast_Score=259, Evalue=1e-68,
Organism=Homo sapiens, GI261878481, Length=599, Percent_Identity=29.5492487479132, Blast_Score=256, Evalue=7e-68,
Organism=Homo sapiens, GI166851804, Length=596, Percent_Identity=31.7114093959732, Blast_Score=254, Evalue=3e-67,
Organism=Homo sapiens, GI167830436, Length=563, Percent_Identity=31.0834813499112, Blast_Score=249, Evalue=1e-65,
Organism=Homo sapiens, GI100913206, Length=648, Percent_Identity=28.858024691358, Blast_Score=230, Evalue=5e-60,
Organism=Homo sapiens, GI20336300, Length=647, Percent_Identity=27.2024729520866, Blast_Score=222, Evalue=2e-57,
Organism=Homo sapiens, GI163914394, Length=645, Percent_Identity=26.046511627907, Blast_Score=194, Evalue=5e-49,
Organism=Homo sapiens, GI29029601, Length=419, Percent_Identity=30.5489260143198, Blast_Score=172, Evalue=2e-42,
Organism=Homo sapiens, GI67782362, Length=202, Percent_Identity=44.0594059405941, Blast_Score=167, Evalue=5e-41,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=40.2116402116402, Blast_Score=148, Evalue=4e-35,
Organism=Homo sapiens, GI39777586, Length=346, Percent_Identity=31.2138728323699, Blast_Score=147, Evalue=6e-35,
Organism=Escherichia coli, GI145693127, Length=1281, Percent_Identity=99.687743950039, Blast_Score=2623, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.1473922902494, Blast_Score=238, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17535281, Length=641, Percent_Identity=36.1934477379095, Blast_Score=410, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI17554326, Length=630, Percent_Identity=37.6190476190476, Blast_Score=405, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI25144243, Length=673, Percent_Identity=33.4323922734027, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17531507, Length=641, Percent_Identity=35.4134165366615, Blast_Score=379, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI32565154, Length=643, Percent_Identity=33.9035769828927, Blast_Score=376, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17556386, Length=646, Percent_Identity=35.2941176470588, Blast_Score=365, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI71990212, Length=677, Percent_Identity=31.9054652880355, Blast_Score=346, Evalue=4e-95,
Organism=Caenorhabditis elegans, GI71996313, Length=562, Percent_Identity=34.5195729537367, Blast_Score=294, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI86562256, Length=590, Percent_Identity=27.4576271186441, Blast_Score=180, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17552054, Length=445, Percent_Identity=28.5393258426966, Blast_Score=159, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=29.1553133514986, Blast_Score=149, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6320850, Length=635, Percent_Identity=36.2204724409449, Blast_Score=419, Evalue=1e-117,
Organism=Saccharomyces cerevisiae, GI6321318, Length=647, Percent_Identity=36.3214837712519, Blast_Score=412, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6322939, Length=648, Percent_Identity=37.8086419753086, Blast_Score=361, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=34.0361445783133, Blast_Score=344, Evalue=6e-95,
Organism=Saccharomyces cerevisiae, GI6322772, Length=661, Percent_Identity=33.5854765506808, Blast_Score=330, Evalue=7e-91,
Organism=Saccharomyces cerevisiae, GI6323451, Length=594, Percent_Identity=28.2828282828283, Blast_Score=229, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.0138248847926, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20129977, Length=646, Percent_Identity=37.4613003095975, Blast_Score=409, Evalue=1e-114,
Organism=Drosophila melanogaster, GI19921526, Length=672, Percent_Identity=35.5654761904762, Blast_Score=405, Evalue=1e-112,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=35.1477449455677, Blast_Score=405, Evalue=1e-112,
Organism=Drosophila melanogaster, GI18859729, Length=637, Percent_Identity=36.734693877551, Blast_Score=380, Evalue=1e-105,
Organism=Drosophila melanogaster, GI19920696, Length=646, Percent_Identity=35.7585139318885, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI45550174, Length=659, Percent_Identity=34.1426403641882, Blast_Score=363, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24643238, Length=560, Percent_Identity=33.3928571428571, Blast_Score=311, Evalue=2e-84,
Organism=Drosophila melanogaster, GI24585491, Length=615, Percent_Identity=29.5934959349594, Blast_Score=270, Evalue=5e-72,
Organism=Drosophila melanogaster, GI24642763, Length=535, Percent_Identity=30.8411214953271, Blast_Score=234, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24585920, Length=522, Percent_Identity=31.4176245210728, Blast_Score=226, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=31.5126050420168, Blast_Score=226, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17136342, Length=525, Percent_Identity=31.4285714285714, Blast_Score=226, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17136508, Length=598, Percent_Identity=29.4314381270903, Blast_Score=198, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17136242, Length=235, Percent_Identity=39.1489361702128, Blast_Score=158, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24641139, Length=358, Percent_Identity=28.2122905027933, Blast_Score=135, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 146715; Mature: 146715

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]