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The map label for this gene is ydcF [H]

Identifier: 82544159

GI number: 82544159

Start: 1655799

End: 1656641

Strand: Reverse

Name: ydcF [H]

Synonym: SBO_1673

Alternate gene names: 82544159

Gene position: 1656641-1655799 (Counterclockwise)

Preceding gene: 82544160

Following gene: 82544158

Centisome position: 36.65

GC content: 51.01

Gene sequence:

>843_bases
ATGAACATTACCCCGTTTCCGACGCTTTCGCCGGCAACTATAGATGCCATAAATGTTATCGGACAGTGGCTGGCGCAGGA
TGATTTCTCCGGTGAGGTGCCGTATCAGGCCGATTGCGTGATCCTTGCAGGCAATGCGGTTATGCCGACTATCGACGCGG
CATGTAAGATTGCTCGCGATCAGCAAATTCCTTTACTGATTAGTGGTGGTATCGGTCACTCGACAACTTTTTTGTATAGC
GCCATCGCACAGCATCCGCACTACAACACTATCCGCACCACTGGCAGAGCAGAAGCGACCATCCTGGCGGATATCGCTCA
TCAGTTCTGGCACATTCCGCATGAAAAAATCTGGATTGAAGACCAGTCAACAAACTGCGGTGAAAACGCACGCTTTAGCA
TCGCGCTATTTAATCAGGCCGTAGAACGAGTTCATACGGCTATCGTTGTTCAGGACCCCACCATGCAGCGGCGCACGATG
GCGACGTTCCGCCGTATGACTGGGGACAATCCCGATGCACCACGCTGGTTAAGTTATCCCGGATTCGTTCCTCAGTTAGG
AAATAACGCAGACAGTGTAATCTTTATTAATCAGTTACAAGGATTATGGCCGGTTGAGCGTTATCTCTCACTACTCACTG
GCGAGCTGCCGCGTTTACGCGATGATAGCGATGGCTACGGTCCCCGCGGGCGAGATTTTATCGTTCACGTTGATTTTCCG
GCAGAAGTCATCCATGCATGGCAAACGCTTAAACACGATGCGGTGCTCATCGAGGCGATGGAAAGTCGCTCGTTACGTCA
AAAATTGCCCGTTTGTGAACCACTTGTTTGCAAACGGGCATGA

Upstream 100 bases:

>100_bases
CGGAGTGGCGGTTAAGGACATACGACTTCCTCCTTTCAGAGTGCTCAGCTTCTCACTATTATCTCACGCAGTATTCTTAA
GGGAACGATAAGGAGGAACC

Downstream 100 bases:

>100_bases
CTCCTGACTTTTATTTCTGCCTTTTATTCCTTTTACACTTGTTTTTATGAAGCCCTTCACAGAATTGTCCTTTCACGATG
CCGTCTCTATGATGATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYS
AIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP
AEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLVCKRA

Sequences:

>Translated_280_residues
MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYS
AIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP
AEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLVCKRA
>Mature_280_residues
MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYS
AIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP
AEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLVCKRA

Specific function: Binds S-adenosyl-L-methionine (AdoMet) [H]

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO4629 [H]

Homologues:

Organism=Escherichia coli, GI1787683, Length=266, Percent_Identity=99.6240601503759, Blast_Score=550, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 31306; Mature: 31306

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARD
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCC
QQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIE
CCCCEEEECCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEE
DQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYP
CCCCCCCCCCEEEHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCC
GFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCH
AEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLVCKRA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARD
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCC
QQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIE
CCCCEEEECCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEE
DQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYP
CCCCCCCCCCEEEHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECCC
GFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCH
AEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLVCKRA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10493123 [H]