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The map label for this gene is stfR [H]

Identifier: 82544113

GI number: 82544113

Start: 1610127

End: 1610432

Strand: Reverse

Name: stfR [H]

Synonym: SBO_1622

Alternate gene names: 82544113

Gene position: 1610432-1610127 (Counterclockwise)

Preceding gene: 82544114

Following gene: 82544112

Centisome position: 35.63

GC content: 52.94

Gene sequence:

>306_bases
ATGGCAGTAAAGATTTCAGGTGTACTGAAAGATGGGGCGGGTAAACCTGTCGTAAATTGTGCGATTGAACTGCGGGCCAG
AAGAACCAGTCCGACCGTTGTGGCACACGTTGTTGCCACTTGCGTGACGGACAATAACGGTGCTTATGTGATTGAGGCTG
AGCCGGGGTATTACGAGGTTGCGCTTCACTGTAACGGCTGGCAGCCAACCCGTGTCGGGGATATTGATGTGGCACCGACT
GATGCACCGGGGACACTGAACGCGTTTCTGAATGCACCAAAGATGGTGATTTACGTCCGGAAGTGA

Upstream 100 bases:

>100_bases
TGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGC
GGGCTTTTTGTGGGGTGAAT

Downstream 100 bases:

>100_bases
TGAAGCGCTTTGAGGAATGGTGGTGCAGGCGCAGCAAAGCGCCGGGGCCGCAGCCGGAAACGCACAGCAAACGGCGCAGG
ATGTGGCGGCAGCCGCAACG

Product: tail component encoded by cryptic prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPT
DAPGTLNAFLNAPKMVIYVRK

Sequences:

>Translated_101_residues
MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPT
DAPGTLNAFLNAPKMVIYVRK
>Mature_100_residues
AVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTD
APGTLNAFLNAPKMVIYVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=92, Percent_Identity=52.1739130434783, Blast_Score=92, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 10737; Mature: 10606

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEV
CEEEEEEEEECCCCCCEEEEEEEEEECCCCCHHHEEEEEEEEECCCCEEEEEECCCEEEE
ALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKMVIYVRK
EEEECCCCCCCCCCEECCCCCCCCCCCEECCCCEEEEEEEC
>Mature Secondary Structure 
AVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTDNNGAYVIEAEPGYYEV
EEEEEEEEECCCCCCEEEEEEEEEECCCCCHHHEEEEEEEEECCCCEEEEEECCCEEEE
ALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKMVIYVRK
EEEECCCCCCCCCCEECCCCCCCCCCCEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]