Click here to switch to the map view.

The map label for this gene is yncA [H]

Identifier: 82544091

GI number: 82544091

Start: 1592713

End: 1593231

Strand: Direct

Name: yncA [H]

Synonym: SBO_1600

Alternate gene names: 82544091

Gene position: 1592713-1593231 (Clockwise)

Preceding gene: 82544090

Following gene: 82544092

Centisome position: 35.24

GC content: 52.79

Gene sequence:

>519_bases
ATGTCCATCCGTTTTGCCCGCAAAGCCGATTGTGCTGCCATTGCGGAAATTTATAACCACGCCGTGTTGTATACGGCGGC
TATCTGGAATGACCAAACGGTTGATGCAGATAACCGCATTGCCTGGTTTGAAGCGCGGACCATAGCAGGTTATCCGGTGC
TGGTAAGTGAAGAAGATGGCGTAGTGACGGGATATGCCTCGTTTGGCGACTGGCGTAGTTTCGATGGTTTTCGCCATACC
GTGGAACATTCGGTTTATGTCCATCCCGATCATCAGGGCAAAGGTCTGGGGCGTAAATTGTTAAGCCGATTGATTGATGA
AGCGCGGGATAGCGGGAAGCATGTCATGGTCGCCGGGATCGAATCGCAAAATCAGGCCTCGCTGCATCTGCACCATTCGC
TGGGATTTGTCGTCACCGCACAAATGCCGCAGGTGGGCACTAAATCTGGGCGCTGGCTGGATCTGACATTTATGCAGTTG
CAACTCGACGAACGCACTGAACCGGACGCGATTGGATGA

Upstream 100 bases:

>100_bases
CCCTCTGCAACACGCAATAATTTCATCGAGGAATCCGTTGCTTCGGGCTGTTTTCGATAGTATTGATAACATCATCATCA
TTATTTTATCGAGGCCAGAC

Downstream 100 bases:

>100_bases
ATCAGTCGCTCACCCTTGCTTTTTTGATTGCCGCCGGAATTGGTCTGGTAGTCCAGAACACGCTGATGGTGCGCATCACC
CAGACCTCCTCTACCATTCT

Product: resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHT
VEHSVYVHPDHQGKGLGRKLLSRLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKSGRWLDLTFMQL
QLDERTEPDAIG

Sequences:

>Translated_172_residues
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHT
VEHSVYVHPDHQGKGLGRKLLSRLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKSGRWLDLTFMQL
QLDERTEPDAIG
>Mature_171_residues
SIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTV
EHSVYVHPDHQGKGLGRKLLSRLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKSGRWLDLTFMQLQ
LDERTEPDAIG

Specific function: Unknown

COG id: COG1247

COG function: function code M; Sortase and related acyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787719, Length=172, Percent_Identity=97.0930232558139, Blast_Score=348, Evalue=8e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 19182; Mature: 19051

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG
CCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCEECCCCEEEEEEEEEECCCEEEEECCCC
VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDSGKHVMVAGI
EEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
ESQNQASLHLHHSLGFVVTAQMPQVGTKSGRWLDLTFMQLQLDERTEPDAIG
CCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG
CCCCCCCCCHHHHHHHHCCEEEEEEEECCCCEECCCCEEEEEEEEEECCCEEEEECCCC
VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDSGKHVMVAGI
EEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
ESQNQASLHLHHSLGFVVTAQMPQVGTKSGRWLDLTFMQLQLDERTEPDAIG
CCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]