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The map label for this gene is ydeP [H]

Identifier: 82544049

GI number: 82544049

Start: 1540409

End: 1542688

Strand: Direct

Name: ydeP [H]

Synonym: SBO_1555

Alternate gene names: 82544049

Gene position: 1540409-1542688 (Clockwise)

Preceding gene: 161984936

Following gene: 82544050

Centisome position: 34.08

GC content: 50.13

Gene sequence:

>2280_bases
ATGAAGAAAAAAATTGAATCCTACCAGGGTGCTGCAGGTGGTTGGGGTGCTGTTAAATCCGTAGCGAATGCAGTACGTAA
GCAGATGGATATACGCCAGGATGTTATTGCCATGTTTGACATGAATAAGCCAGAGGGCTTTGACTGTCCGGGTTGTGCAT
GGCCAGATCCTAAGCACACTGCGTCATTCGACATTTGTGAAAACGGCGCAAAAGCAATCGCCTGGGAAGTCACGGATAAG
CAGGTAAATGCCTCTTTCTTTGCTGAGAATACGGTTCAATCATTACTTACCTGGGGAGATCACGAGCTTGAGGCTGCGGG
ACGTCTCACTCAGCCTTTGAAATATGATGCCGTCAGCGACTGTTACAAGCCATTAAGCTGGCAACAAGCTTTCGACGAAA
TTGGCGCACGCCTTCAAAGCTATAGTGATCCCAATCAGGTTGAATTCTATACTTCGGGCCGCACTTCCAATGAAGCTGCC
TTTCTTTATCAGCTTTTTGCCCGTGAATACGGGAGCAATAACTTTCCCGACTGCTCCAACATGTGCCATGAACCGACCAG
TGTGGGTTTGGCAGCGAGTATCGGCGTGGGTAAAGGGACTGTGTTGCTGGAAGACTTTGAGAAGTGCGATTTAGTCATTT
GCATTGGGCATAACCCTGGTACAAACCACCCCCGCATGCTGACTTCGTTGCGCGCTTTAGTGAAACGGGGAGCGAAAATG
ATCGCCATCAATCCTTTACAGGAACGTGGCCTGGAGCGATTTACCGCACCGCAAAACCCGTTTGAAATGCTGACGAACTC
TGAGACTCAGTTGGCCAGTGCGTACTACAACGTGCGCATTGGTGGCGATATGGCGTTGCTCAAGGGGATGATGCGCCTGT
TAATTGAGCGCGATGATGCTGCAAGTGCCGCAGGTCGGCCCTCATTGCTTGATGACGAATTTATTCAAACGCATACCGTC
GGCTTTGACGAGCTACGCCGTGACGTTCTCAATTCCGAGTGGAAAGATATCGAACATATTTCTGGACTAAGTCAGACACA
AATCGCCGAACTGGCTGACGCATATGCCGCTGCCGATCGCACCATTATCTGTTACGGAATGGGGATCACTCAGCACGAAC
ATGGTACCCAGAATGTACAGCAACTGGTCAATCTGCTGTTGATGAAAGGTAACATTGGCAAGCCTGGTGCGGGTATCTGC
CCACTACGAGGTCACTCTAATGTACAGGGCGACCGAACCGTCGGTATCACCGAGAAACCGTCTGCAGAGTTTCTGGCTCG
CCTGGGTGAGCGCTATGGCTTCACCCCACCTCATGCACCTGGACATGCTGCAATTGCCAGCATGCAAGCAATATGCACGG
GGCAGGCTCGAGCATTGATCTGCATGGGGGGCAACTTTGCACTGGCAATGCCAGATCGGGAAGCGAGCGCTGTACCGTTA
ACGCAATTAGATTTGGCGGTACACGTAGCCACTAAGCTTAACCGCTCTCATCTGCTGACCGCACGGCATAGCTATATTCT
GCCGGTTCTGGGGCGTAGCGAGATTGACATGCAAAAAAGCGGTGCGCAGGCGGTAACCGTTGAGGATTCAATGTCGATGA
TTCATGCCTCGCGTGGCGTGTTAAAACCCGCCGGTGTAATGCTGAAATCAGAGTGTGCAGTGGTCGCGGGAATCGCGCAG
GCAGCACTACCCCAGAGCGTGGTAGCCTGGGAGTATCTGGTGGAAGATTATGATCGCATTCGCAATGACATTGAAGCTGT
GTTACCAGAGTTCGCCGACTATAACCAGCGCATCCGACATCCTGGAGGTTTTCACCTGATAAATGCAGCTGCTGAAAGGC
GCTGGATGACGCCGTCAGGTAAGGCTAATTTCATTACCAGCAAAGGGCTGTTAGAAGATCCCTCTTCAGCGTTTAACAGT
AAGCTGGTCATGGCGACAGTACGCAGCCACGATCAGTACAACACGACGATTTATGGTATGGATGATCGCTATCGAGGGGT
ATTCGGTCAACGAGATGTGGTCTTTATGAGTGCTAAACAAGCTAAAATTTGCCGTGTAAAAAACGGCGAAAGAGTTAATC
TTATTGCGCTTACGCCAGACGGTAAGCGCAGCTCACGCCGCATGGATAGATTAAAAGTGGTCATTTACCCTATGGCTGAC
CGCTCACTGGTGACCTATTTTCCAGAATCGAATCACATGCTAACTCTTGATAACCACGATCCATTAAGTGGCATTCCTGG
TTATAAAAGTATTCCGGTTGAATTAGAACCATCAAATTAA

Upstream 100 bases:

>100_bases
CCTACTCTTATATATCCATGTTGGCGATAATCCCTTTGTATGTACTGTGCATCATCGCTATTACAAATCCTAATAATTCA
TTTCCACACAGGATAAGTAG

Downstream 100 bases:

>100_bases
TTCGCCTCCTCATTTCTTCTGCTGTCATCCGCACAGCAGAAGAATTTCTCATTGACTATTATCGCGCAATTTGCTCACAT
TGATCAAATTAAACCACACA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 759; Mature: 759

Protein sequence:

>759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN

Sequences:

>Translated_759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
>Mature_759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN

Specific function: Probably involved in acid resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=759, Percent_Identity=99.4729907773386, Blast_Score=1582, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=308, Percent_Identity=30.8441558441558, Blast_Score=155, Evalue=8e-39,
Organism=Escherichia coli, GI3868720, Length=376, Percent_Identity=26.063829787234, Blast_Score=109, Evalue=8e-25,
Organism=Escherichia coli, GI3868719, Length=391, Percent_Identity=25.5754475703325, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 83450; Mature: 83450

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHT
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHH
CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
HCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEE
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA
EEECCHHHCCHHHHCCCCCHHHHHCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCC
ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIEHISGLSQTQIAELADAYAAADR
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCH
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV
HHHHHHHHHHHHCCHHHEEEECCCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHCCC
LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH
CCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM
CCCEEEEEHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEC
DDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
CCHHCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHCEEEEEEEECCC
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHT
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHH
CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
HCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEE
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA
EEECCHHHCCHHHHCCCCCHHHHHCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCC
ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIEHISGLSQTQIAELADAYAAADR
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCH
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV
HHHHHHHHHHHHCCHHHEEEECCCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHCCC
LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH
CCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM
CCCEEEEEHHHHCCCCCCCCCCCEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEC
DDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
CCHHCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHCEEEEEEEECCC
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]