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The map label for this gene is ydhA

Identifier: 82543993

GI number: 82543993

Start: 1472498

End: 1472746

Strand: Direct

Name: ydhA

Synonym: SBO_1495

Alternate gene names: 82543993

Gene position: 1472498-1472746 (Clockwise)

Preceding gene: 82543992

Following gene: 82543994

Centisome position: 32.58

GC content: 46.18

Gene sequence:

>249_bases
ATGCAAACCGATACGCTGGAATACCAGTGTGATGAAAAACCGTTGACGGTCAAACTGAATAATCCGCGCCAGGAGGTCAG
TTTTGTTTACGATAATCAACTACTGCATCTCAAACAGGGCATTTCAGCCTCTGGCGCGCGTTACACTGACGGAATCTATG
TTTTCTGGTCGAAAGGCGATGAAGCGACTGTCTATAAACGCGACCGCATCGTCTTGAATAACTGTCAGTTACAAAATCCA
CAGCGTTGA

Upstream 100 bases:

>100_bases
CCAGGAAAGTCTTCGGGATATGACTATGAAAAAACTGTTAATTATCATTTTGCCGGTCCTTCTCTCCGGCTGTAGCGCCT
TTAATCAGCTGGTTGAGCGC

Downstream 100 bases:

>100_bases
GATTTTTCCAGGGGCGGCGCACAATAGCGTCACCCACTGACAATCCGTAAAGAAAACCATGTCTGATAACGACGAATTGC
AGCAAATCGCGCATCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNP
QR

Sequences:

>Translated_82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNP
QR
>Mature_82_residues
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNP
QR

Specific function: Specifically inhibits C-type lysozymes

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI87081949, Length=82, Percent_Identity=100, Blast_Score=175, Evalue=5e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MLIC_ECOLI (P28224)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   M92351
- PIR:   A43261
- RefSeq:   AP_002261.1
- RefSeq:   NP_416156.4
- PDB:   2F09
- PDBsum:   2F09
- ProteinModelPortal:   P28224
- SMR:   P28224
- DIP:   DIP-11726N
- STRING:   P28224
- EnsemblBacteria:   EBESCT00000003952
- EnsemblBacteria:   EBESCT00000016260
- GeneID:   946811
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1631
- KEGG:   eco:b1639
- EchoBASE:   EB1451
- EcoGene:   EG11488
- eggNOG:   COG3895
- GeneTree:   EBGT00050000010880
- HOGENOM:   HBG437057
- OMA:   LAGCSYY
- ProtClustDB:   PRK11372
- BioCyc:   EcoCyc:EG11488-MONOMER
- Genevestigator:   P28224
- InterPro:   IPR018660

Pfam domain/function: PF09864 DUF2091

EC number: NA

Molecular weight: Translated: 9554; Mature: 9554

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGD
CCCCCCEEEECCCCEEEEECCCCCEEEEEECCEEEEECCCCCCCCCEECCCEEEEECCCC
EATVYKRDRIVLNNCQLQNPQR
CEEEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGD
CCCCCCEEEECCCCEEEEECCCCCEEEEEECCEEEEECCCCCCCCCEECCCEEEEECCCC
EATVYKRDRIVLNNCQLQNPQR
CEEEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1356963