| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543908
Identifier: 82543908
GI number: 82543908
Start: 1380376
End: 1380870
Strand: Reverse
Name: 82543908
Synonym: SBO_1404
Alternate gene names: NA
Gene position: 1380870-1380376 (Counterclockwise)
Preceding gene: 82543909
Following gene: 82543907
Centisome position: 30.55
GC content: 60.0
Gene sequence:
>495_bases ATGACTATAGTTGCCAGAACTGAACCCGGACCCGCAGAGGACGACATCACCGATACCGATGATGGCGATACCCGCATTTC AGCGGGTGCATTCTGGCCGGATATTGTGCTGCGCGAGCTGCGTCTGGCGGTACGACTGCCGGGGCGCGTGACCACCTCCC GCCTGCTGCATACTGCCACCGGGGCTGTGGCACACGTTACCCGCGAGCTGGAAGCATGGCAGCAGGAACAGCAGGCAGCT GGCCATCAGACGCTGGCCGATGTTCCGGCACCCGTAATTAACGGAGAAAGCGTCAATCTCTGGCACTGGCGCAATGCTGT TTATACCGCCACGCGCGCCCTGATTCTGGAGCGTTATCGTGATGCAGACACTACGGACAAGGGCGACCGCCGGGCAGACG CTCTGGATATACAGACATCGGATTTGTGGCGTGATGTGAGCTGGGCCATCTCTGACATTCTGTGCCGCCCGCGAATCTTT GCGGAGTTGTGCTGA
Upstream 100 bases:
>100_bases GACTGACCCGTCAGCGGGCGGCGTGCGCGGTGTTCCAGTTTGACTCCGTGACCGTTTACACCGCGCACCCACCGCCGATT TTTTTTCAGGAGTGAACCCC
Downstream 100 bases:
>100_bases TGAAAGTGAAGGCACTGGAAGGCGACACCGTGGATTCGCTCTGTTTCCGGTACTACGGCACGACGCAGGGCGTCACCGAA AAGGTGCTGGATGCCAACCC
Product: capsid completion protein
Products: NA
Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion/Stabilization Protein; Phage Head Completion Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage Head Completion Protein L; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAA GHQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF AELC
Sequences:
>Translated_164_residues MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAA GHQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF AELC >Mature_163_residues TIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAG HQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIFA ELC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18344; Mature: 18212
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTAT CEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH GAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYR HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC DADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIFAELC CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure TIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAVRLPGRVTTSRLLHTAT EEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH GAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWHWRNAVYTATRALILERYR HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC DADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIFAELC CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA