| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543896
Identifier: 82543896
GI number: 82543896
Start: 1372229
End: 1372762
Strand: Direct
Name: 82543896
Synonym: SBO_1392
Alternate gene names: NA
Gene position: 1372229-1372762 (Clockwise)
Preceding gene: 82543894
Following gene: 82543912
Centisome position: 30.36
GC content: 41.95
Gene sequence:
>534_bases ATGATGCACTTAAAAAACATTACTGCTGGCAACCCTAAAACAAAAGAGCAATACCAGCTAACAAAGCAATTTAACATCAA ATGGCTTTATTCAGATGATGGAAAAAACTGGTATGAGGAACAAAAGAATTTCCAGCCAGACACTTTGAAAATGGTCTATT ACCATAACGGCGTTATTATTTGTATTGAAAAGGATGTTTCAGCAATTAATCCGGAAGGCGCAAGCGTCGTTGAATTACCT GATATTACAGCAAATCGCCGGGCTGATATTTCGGGGAAATGGTTGTTCAAAGATGGCGTAGTGATAAAGCGAACTTATAC CGAGGAAGAGCAGAGGCAACAAGCGGAAAATGAAAAGCAAAGCCTGTTGCAACTTGTCAGGGATAAAACCCAGCTATGGG ACTCACAGCTACGGCTGGGCATCATTTCCGACGAGAATAAACAAAAATTAACCGAGTGGATGCTCTATGCGCAGAAAGTC GAATCTACAGACACCTCCAGCCTGCCAGTAACGTTTCCCGAACAACCAGAATGA
Upstream 100 bases:
>100_bases CAGTTAACGGAAACCGTGATGAATTAATTGATACAACACAGGCAAGGCCAATTCAGTATTGCATTAATGGGACGTGGTAT AACGCGGGGAGTATTTAACG
Downstream 100 bases:
>100_bases GAGAAGGCCCGATATTGGGCCTTAATTTTTACTCAGGCTTTTGTGGCCATTCGGGATTTGCTGTATCCACACGGCTGACC AGAACGCTGTAGCGTTCCCA
Product: tail fiber assembly protein
Products: NA
Alternate protein names: Tail Assembly Chaperone Gp; Bacteriophage Tail Fiber Assembly Protein; Phage Tail Fiber Assembly Protein; Bacteriophage Tail Protein; Phage Tail Assembly Chaperone; Phage Gene; Tail Fiber Assembly Protein GpG; Phage Tail Fibre Assembly Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELP DITANRRADISGKWLFKDGVVIKRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV ESTDTSSLPVTFPEQPE
Sequences:
>Translated_177_residues MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELP DITANRRADISGKWLFKDGVVIKRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV ESTDTSSLPVTFPEQPE >Mature_177_residues MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELP DITANRRADISGKWLFKDGVVIKRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV ESTDTSSLPVTFPEQPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20688; Mature: 20688
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYYHNGVII CCCCCCCCCCCCCCHHHHHHHEECCEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCEEE CIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVIKRTYTEEEQRQQAENEKQ EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHH SLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKVESTDTSSLPVTFPEQPE HHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC >Mature Secondary Structure MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYYHNGVII CCCCCCCCCCCCCCHHHHHHHEECCEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCEEE CIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVIKRTYTEEEQRQQAENEKQ EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHH SLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKVESTDTSSLPVTFPEQPE HHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA