| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543892
Identifier: 82543892
GI number: 82543892
Start: 1367121
End: 1367363
Strand: Direct
Name: 82543892
Synonym: SBO_1388
Alternate gene names: NA
Gene position: 1367121-1367363 (Clockwise)
Preceding gene: 82543891
Following gene: 82543893
Centisome position: 30.25
GC content: 53.09
Gene sequence:
>243_bases GTGGAGATCACCGGGGCTATTGAGCAGGCTGGATCCCTGCGTGGTCTGTCGCTGTCTGATGTGCTGAATCTGAAAGCGGA TACCATGTTCACGCTGTTGCCTCGCGTGACCTCGCCACGACTGGATGAAGTGATGATTAAAAAAATGTCGTCACGCGATT TTATTCAGTTGTGCGCTGTGGCTGTAAATTTTATGAGCGAGCCAGACTCTGGCGCGAAGAGCGTGCAGGAGACGGCAGCG TAA
Upstream 100 bases:
>100_bases CACCGTGGCGGATAATGTGACGGCAGTTGAGGATATGGCTGTCGAACGTGGCGTAAAACTGACCCGACCAATTGAGCGTG GTGCCGAAAAAATCACGTAT
Downstream 100 bases:
>100_bases TCACCCTGGTGTGCTTTGAGCACATCGAAGATCTGGTGGCGGATATTGCCGCCATTTTTAACTGGTCGCCCGCCGAAATC TTCATGATGACGCCCGGCGA
Product: tail protein
Products: NA
Alternate protein names: Phage Tail Protein
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA
Sequences:
>Translated_80_residues MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA >Mature_80_residues MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8633; Mature: 8633
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAV CCCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH AVNFMSEPDSGAKSVQETAA HHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAV CCCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH AVNFMSEPDSGAKSVQETAA HHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA