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The map label for this gene is ydjX [H]

Identifier: 82543847

GI number: 82543847

Start: 1322837

End: 1323463

Strand: Reverse

Name: ydjX [H]

Synonym: SBO_1340

Alternate gene names: 82543847

Gene position: 1323463-1322837 (Counterclockwise)

Preceding gene: 82543848

Following gene: 82543846

Centisome position: 29.28

GC content: 46.73

Gene sequence:

>627_bases
TTGTCTGACCACTTCTCTATTATCAAGTTTGATATAGGAAACTCCACGATGAATGCTGAGCGTAAATTTCTTTTCGCCTG
TCTTATTTTTGCGCTGGTCATTTACGCTATCCACGCTTTCGGTTTATTCGATCTGCTCACCGATTTACCCCACTTACAGA
CACTCATTCGCCAGAGCGGATTGTTCGGTTATAGCCTCTATATTCTGTTATTCATCATTGCCACCCTCTTTCTGTTACCA
GGAAGCATACTGGTGATCGCTGGAGGAATAGTTTTTGGCCCGCTCTTAGGGACACTACTCTCATTAATTGCCGCCACGCT
GGCCTCCTCGTGCTCATTCCTGCTGGCGCGGTGGCTGGGACGTGATTTACTGCTGAAATACGTGGGCCATAGCCATACCT
TCCAGGCCATTGAAAAAGGCATTGCGCGTAACGGTATTGATTTTCTTATTCTGACCCGCTTAATCCCGTTGTTTCCTTAC
AATATTCAAAATTACGCTTACGGATTAACCACCATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTGCC
CGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTGGTAA

Upstream 100 bases:

>100_bases
TCAAACTGGGTCAGGAGAATTAACCTTGAGAAAAATCAACAAACTGTCAGTAATGATTTGTTGCCTGCCGTCCTTTGTTA
TACCGTCACTGCGTTTTTAG

Downstream 100 bases:

>100_bases
TGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCC
TGCTCCGCTACTGAAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSDHFSIIKFDIGNSTMNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATLFLLP
GSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPY
NIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMASDLANEGITLRW

Sequences:

>Translated_208_residues
MSDHFSIIKFDIGNSTMNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATLFLLP
GSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPY
NIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMASDLANEGITLRW
>Mature_207_residues
SDHFSIIKFDIGNSTMNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATLFLLPG
SILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYN
IQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMASDLANEGITLRW

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=192, Percent_Identity=97.9166666666667, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1788049, Length=153, Percent_Identity=26.797385620915, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23040; Mature: 22909

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHFSIIKFDIGNSTMNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLI
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SALTTLPGIVIYTVMASDLANEGITLRW
HHHHHHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
SDHFSIIKFDIGNSTMNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLI
HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SALTTLPGIVIYTVMASDLANEGITLRW
HHHHHHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]