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The map label for this gene is ynjB [H]

Identifier: 82543842

GI number: 82543842

Start: 1318800

End: 1319966

Strand: Reverse

Name: ynjB [H]

Synonym: SBO_1335

Alternate gene names: 82543842

Gene position: 1319966-1318800 (Counterclockwise)

Preceding gene: 82543843

Following gene: 82543841

Centisome position: 29.2

GC content: 55.87

Gene sequence:

>1167_bases
ATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTTTGGCAACACATGCCAGTGACTGGCAGGAAATTAA
AAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTTA
GCGGCGAGATGAAAACCCATTACGCTATAAACCTGAAGATTGTTCGTCTCGCGGATGCCGCAGACGCGGTGAAGCGCATT
CAGACCGAAGCTGCTGCCGGTCGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGCGAAAACTTCCGCACCTT
AAAAGAGGCCAATTTATTACAAACGGGCTGGGCGGAGACTCTGCCCAACTGGCGCTATGTCGACACACAGCTGCCGGTGC
GGGAAGATTTTTCAGTGCCGACACAAGGTGCGGAATCGCCCTGGGGCGGCGCACAACTGACGTTTATCGCCCGCCGCGAT
GTTACGCCACAGCCACCACAAACGCCGCAAGCCTTACTGGAGTTTGCTAAAGCCAATCCCGGCACGGTTACTTATCCGCG
CCCACCGGACTTTACCGGCACGGCGTTTCTTGAACAGTTGCTGATTATGCTGACGCCAGATCCCGCCGCATTAAAAGAAG
CGCCGGACGATGCGACTTTCGCCCGTGTCACTGCGCCCTTGTGGCAATATCTTGATGCACTGCATCCGTATTTGTGGCGC
GAAGGAAAGGATTTCCCGCCTTCGCCCGCGCGGATGGATGCTCTGCTGAAAGCCGGCACATTGCGCCTGTCGCTGACCTT
TAACCCCGCGCATGCGCAGCAAAAAATCGCCAGCGGCGATTTGCCGGCAAGCAGTTACAGTTTTGGCTTTCGCGAGGGGA
TGATTGGCAACGTGCATTTCGTCACCATTCCAGCCAACGCGAATGCCAGTGCTGCGGCGAAGGTAGTTGCCAATTTTCTG
CTCTCACCCGATGCGCAACTGCGTAAAGCAGATCCCGTTGTCTGGGACGATCCTTCTGTTCTCGATCCGCAAAAACTGCC
TGACGGGCAGCGCGAAATATTGCAATCAAGAATGCCGCAGGATCTGCCGCCGGTACTGGCTGAACCGCACGCAGGATGGG
TGAATGCACTGGAACAAGAATGGTTACGCCGTTACGGTACGCATTAA

Upstream 100 bases:

>100_bases
GATCGGCCTGCAAAACCTGTCGGCTCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCGGAAA
AACGTTCTTAAGGAGAGAAG

Downstream 100 bases:

>100_bases
TCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCTCACGCTGATATCGCCTGCGTTG
TCGTTGACACACTGGCAGGC

Product: ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDALHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPVVWDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH

Sequences:

>Translated_388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDALHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPVVWDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH
>Mature_388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDALHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPVVWDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=388, Percent_Identity=98.7113402061856, Blast_Score=780, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 42948; Mature: 42948

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHH
LPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCC
GTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDALHPYLWR
CEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHF
CCCCCCCCHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEE
VTIPANANASAAAKVVANFLLSPDAQLRKADPVVWDDPSVLDPQKLPDGQREILQSRMPQ
EEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCHHCCCCHHHHHHHHHCCC
DLPPVLAEPHAGWVNALEQEWLRRYGTH
CCCCHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHH
LPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCC
GTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDALHPYLWR
CEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHF
CCCCCCCCHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEE
VTIPANANASAAAKVVANFLLSPDAQLRKADPVVWDDPSVLDPQKLPDGQREILQSRMPQ
EEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCHHCCCCHHHHHHHHHCCC
DLPPVLAEPHAGWVNALEQEWLRRYGTH
CCCCHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]