| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yeaO [H]
Identifier: 82543810
GI number: 82543810
Start: 1286435
End: 1286803
Strand: Reverse
Name: yeaO [H]
Synonym: SBO_1301
Alternate gene names: 82543810
Gene position: 1286803-1286435 (Counterclockwise)
Preceding gene: 82543811
Following gene: 82543807
Centisome position: 28.47
GC content: 52.57
Gene sequence:
>369_bases GTGAAAGGGAGAACAAACACGATGAATATTCAGTGCAAACGCGTTTATGATCCGGCTGAACAGAGCGATGGTTATCGCGT ACTGGTCGACCGCCTCTGGCCGCGCGGTATCAAAAAAACCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGT CAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTTTACAACCTTTCGCGAGCAATATCTTGCAGAACTGGCG CAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACGCAGCAAAAAACAC CACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGA
Upstream 100 bases:
>100_bases TGCAATACTTTCACTACTGATGGCGATTTTCGGACTTTGCGCCGGGAGAGACAAAGAAATTCGCTCATATCCGGTGCTAT AGTGACGTGACAAATCATGC
Downstream 100 bases:
>100_bases TTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCCCGTCGCCACAATGCCCATTCATCAATCGTTTCAC CGCCCGGTAATTTGCAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVDFTTFREQYLAELA QHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLRSL
Sequences:
>Translated_122_residues MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVDFTTFREQYLAELA QHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLRSL >Mature_122_residues MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVDFTTFREQYLAELA QHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLRSL
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3073c [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=115, Percent_Identity=96.5217391304348, Blast_Score=235, Evalue=7e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 14159; Mature: 14159
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKA CCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHCCCCCCCHHCHHHHHCCCCCCHHHHHHH FHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH SL HC >Mature Secondary Structure MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKA CCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHCCCCCCCHHCHHHHHCCCCCCHHHHHHH FHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH SL HC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]