| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is pphA [H]
Identifier: 82543762
GI number: 82543762
Start: 1248969
End: 1249628
Strand: Reverse
Name: pphA [H]
Synonym: SBO_1253
Alternate gene names: 82543762
Gene position: 1249628-1248969 (Counterclockwise)
Preceding gene: 82543763
Following gene: 82543756
Centisome position: 27.65
GC content: 47.88
Gene sequence:
>660_bases TTGATGAAACAGCCTGCGCCCGTTTATCAGAGAATTGCGGGTCATCAATGGCGACATATCTGGCTTTCTGGCGATATACA CGGTTGTCTTGAGCAGTTGCGCCGCAAATTATGGCATTGTCGTTTTGATCCGTGGCGAGATTTACTTATCTCAGTGGGAG ACGTTATCGATCGTGGGCCGCAAAGTTTACGTTGTCTGCAGTTACTGGAACAACATTGGGTTTGTGCGGTAAGAGGCAAT CATGAACAGATGGCGATGGATGCGCTGGCATCCCAGCAGATGTCTTTGTGGTTGATGAATGGCGGCGACTGGTTTATTGC GCTGGCAGATAATCAACAGAAACAAGCGAAAACGGCGCTGGAAAAATGTCAGCATTTGCCCTTTATTCTTGAAGTACACA GTCGCACCGGCAAGCATGTTATTGCTCATGCGGATTATCCAGATGATGTTTATGAATGGCAAAAGGACGTTGATTTGCAT CAGGTCTTGTGGAGCCGCTCGCGATTAGGTGAACGCCAAAAAGGGCAGGGAATTACAGGTGCTGATCATTTCTGGTTTGG TCATACACCGTTGCGACATCGCGTGGATATTGGCAACCTGCATTATATTGATACCGGTGCTGTCTTTGGGGGCGAACTGA CTCTTGTGCAATTGCAATGA
Upstream 100 bases:
>100_bases TGACTTTATAGTCAACCATAACACACACTCTACTGTCTGAGTCCAGCGTTTTTTAACATTCTTGTTAAGATTATGTGATC TTTAGCACGGGAGGAAAATA
Downstream 100 bases:
>100_bases TTAAAAATCACCGTACTCCTGTGCAGGTCGCCAGAAACCATCTATAAAATCCTCAATCGGAAAACAACCGCCCTGGCGGA TCCGTTGATCGCTCATAGAA
Product: serine/threonine protein phosphatase 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MMKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGN HEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLH QVLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
Sequences:
>Translated_219_residues MMKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGN HEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLH QVLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ >Mature_219_residues MMKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGN HEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLH QVLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
Specific function: Plays a key role in signaling protein misfolding via the CpxR/CPXA transducing system. It also modulates the phosphorylated status of many phosphoproteins in E.coli, some of which acting as major chaperones. Has been shown, in vitro, to act on Ser, Thr an
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPP phosphatase family. PP-1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081988, Length=218, Percent_Identity=100, Blast_Score=448, Evalue=1e-127, Organism=Escherichia coli, GI1789090, Length=217, Percent_Identity=43.778801843318, Blast_Score=188, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 25405; Mature: 25405
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: PS00125 SER_THR_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGP CCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH QSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTAL HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCHHHHHHHH EKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITG HHHHCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCC ADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ CCCEEECCCCCHHEECCCCEEEEECCCEECCEEEEEEEC >Mature Secondary Structure MMKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGP CCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH QSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTAL HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCHHHHHHHH EKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITG HHHHCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCC ADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ CCCEEECCCCCHHEECCCCEEEEECCCEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9130712; 9097040; 9278503 [H]