| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yebV [H]
Identifier: 82543760
GI number: 82543760
Start: 1248421
End: 1248672
Strand: Direct
Name: yebV [H]
Synonym: SBO_1251
Alternate gene names: 82543760
Gene position: 1248421-1248672 (Clockwise)
Preceding gene: 82543759
Following gene: 82543761
Centisome position: 27.62
GC content: 49.21
Gene sequence:
>252_bases ATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCC GGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTCGATGCCTGGGATGCTGAAACCA GTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATG CGTCTTGCCTGA
Upstream 100 bases:
>100_bases GCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTC GTACCACAACCGGCAGCTAA
Downstream 100 bases:
>100_bases TCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGT ACGGCACCACACTTCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MESTKMKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIM RLA
Sequences:
>Translated_83_residues MESTKMKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIM RLA >Mature_83_residues MESTKMKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIM RLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081986, Length=78, Percent_Identity=100, Blast_Score=165, Evalue=6e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009950 - ProDom: PD060427 [H]
Pfam domain/function: PF07351 DUF1480 [H]
EC number: NA
Molecular weight: Translated: 9330; Mature: 9330
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTKMKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLN CCCCCCEEEEEEEEEECCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEC GEHSVLYRTRYDQQSDAWIMRLA CCEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure MESTKMKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLN CCCCCCEEEEEEEEEECCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEC GEHSVLYRTRYDQQSDAWIMRLA CCEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]