Click here to switch to the map view.

The map label for this gene is 82543737

Identifier: 82543737

GI number: 82543737

Start: 1223258

End: 1224346

Strand: Reverse

Name: 82543737

Synonym: SBO_1227

Alternate gene names: NA

Gene position: 1224346-1223258 (Counterclockwise)

Preceding gene: 82543738

Following gene: 82543734

Centisome position: 27.09

GC content: 49.49

Gene sequence:

>1089_bases
ATGAACAACAATAACACATTGTACGTCGGGTTAGATGTTCACAAAGAATCGATTACTGTCGCTTATGCTATCAATTCAGA
ACCTGTTGAACTGATGGGTAAAATTGGCACATCACCTACTGATATTCAGAATCTTTGTAAACGTCTCAGGTCAAAGTCAT
CGCAGGTCAGTATCGTTTATGAAGCGGGGCCCTGTGGTTATGGACTTTATCGTCGGCTGGTGAAATCCGGTTTTGACTGC
ATGGTCTGCGCCCCCTCACTTATCCCGAAAAAACCGGGGGAGCGGGTTAAAACCGATCGCCGTGATGCCATCAAACTTGT
GCGTTCACTGCGTGCAGGAAATCTTTCTGCTGTCTACGTACCCGGCATTGAAAATGAGGCATTCCGGGATTTGGCCCGGG
CATGGGCATCTGCCCGCGATGATTTACGGCATGCAAGGCAACGTCTGAAATCGTTTCTTCTGGTTCATGGGGTCCATTAT
GTCGGGCGAGCAGATTGGGGCCCTGCACACCGACGCTGGCTCAGCAAATACTCATTCGAAAGTCCCTGGCGACAATTAGC
TTTTGACGAACACCGTCGTACAATAGAAGACCGGCAGGCACAATGTGAACGGCTGGAATCCGCCCTGAAGGAGGCCGTTA
CCGAATGGAGGCTGTATCCGGTAGTAGAGGCGCTGCAAGCCATGCGAGGGATTCAGTTTATTACTGCGGTTGGATTAATT
TCTGAACTGGGTGATCTGACCCGTTTTGAACATCCACGACAACTGATGTCATGGTTTGGTATCACGCCATCAGAATATTC
ATCGGGTGGAAGCAGACATCAGGGCAGCATTACCAAAGCCGGAAACAGCTATGCCAGAAAGCTATTGGTCGAGGCAGCGT
GGAGTTACCGTCATCCGGCACGCATCAGTCCGGCAATACAAAAAAGCAGGAAAATTTACCCCGCCCCGTCATTGACAGAG
CATGGGATGCTCAACTCAGGCTTTGTAAGAGGTATCGAAAACTTCAGGCCAAAGGAAAGAATGTCAATATTACAATTGTT
GCTGTTGCACGTGAGCTGGCGGGTTTTATCTGGGATATGGGCCGAATAG

Upstream 100 bases:

>100_bases
TGCTGGCCAACGTGGGATATTTAACGCGGGTTAACATCGTTGTCAGAGCCGCATGGGTGAGCTGTTGCTACACCCCGGTA
TTTCCACCACGGAGGCCAGC

Downstream 100 bases:

>100_bases
CAATGTCTGTCGCACAACAACCACAATGTCACAAATAAAAAATGAGAATAACCAGTTCCCTGAAGGCGACGTAGCCCGGT
ACAAGAGTAACTCACGTTAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDC
MVCAPSLIPKKPGERVKTDRRDAIKLVRSLRAGNLSAVYVPGIENEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHY
VGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLI
SELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKSRKIYPAPSLTE
HGMLNSGFVRGIENFRPKERMSILQLLLLHVSWRVLSGIWAE

Sequences:

>Translated_362_residues
MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDC
MVCAPSLIPKKPGERVKTDRRDAIKLVRSLRAGNLSAVYVPGIENEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHY
VGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLI
SELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKSRKIYPAPSLTE
HGMLNSGFVRGIENFRPKERMSILQLLLLHVSWRVLSGIWAE
>Mature_362_residues
MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDC
MVCAPSLIPKKPGERVKTDRRDAIKLVRSLRAGNLSAVYVPGIENEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHY
VGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLI
SELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPARISPAIQKSRKIYPAPSLTE
HGMLNSGFVRGIENFRPKERMSILQLLLLHVSWRVLSGIWAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 41089; Mature: 41089

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVY
CCCCCEEEEEEEEECCEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
EAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRDAIKLVRSLRAGNLSAVYV
ECCCCCHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEE
PGIENEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRWLSKYSFE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
SPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPA
HHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCC
RISPAIQKSRKIYPAPSLTEHGMLNSGFVRGIENFRPKERMSILQLLLLHVSWRVLSGIW
CCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AE
CC
>Mature Secondary Structure
MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQNLCKRLRSKSSQVSIVY
CCCCCEEEEEEEEECCEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
EAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRDAIKLVRSLRAGNLSAVYV
ECCCCCHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEEE
PGIENEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRWLSKYSFE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
SPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGIQFITAVGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLLVEAAWSYRHPA
HHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCC
RISPAIQKSRKIYPAPSLTEHGMLNSGFVRGIENFRPKERMSILQLLLLHVSWRVLSGIW
CCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]