| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543656
Identifier: 82543656
GI number: 82543656
Start: 1140677
End: 1141138
Strand: Direct
Name: 82543656
Synonym: SBO_1138
Alternate gene names: NA
Gene position: 1140677-1141138 (Clockwise)
Preceding gene: 82543655
Following gene: 82543657
Centisome position: 25.24
GC content: 56.06
Gene sequence:
>462_bases ATGGCTACGATCCCCACTCAGACACACCCGTTACTTGCTGTTCCCTTCAGTGCTGCCACAGATTTTACCGTACTGGCAGA CCACTGCGAAAACGTCGCCGAAACCCTGATCGAAAGCGAAGATCCGGTGCTGCGGCTGGCGCTTTGCGGGCGACTTGCCG CCTGTCTCACTTTGCTGCAACCCACGCTGAACGACCCCATCCCGTCTCATCTGACTGACAGCCTGACCGTTGATGCTCTA CCTGCCGATATGCCCCGATTTGTCCCCGACGCAGAATTACTTTGTGATTACTCACTGACGCTGGCGCAACTTCTTATCGG GCAGGGGATGCAGCCAAAAGTGGAGCAGACGATAACAGGCTTATTATGTGAACTGGTCTGGTATTTTGCCGCCGAAATGA AAGCCCCGCGCTGGCTCCGCACCGCCGATGGCGTGAAGTTTATCGACGAGGTGGCTGCATGA
Upstream 100 bases:
>100_bases GTTCCAGTATGGCCGGTAGTTCCAACCTCGTTCAGTCCACCACCCATGAGATTGGAACCTCTGGTGGTGGTTTTCAAACC ACATACTGGAGGCTGCCTTT
Downstream 100 bases:
>100_bases TGCTGCAGGACTGGCATCCTGCCGACATTATCGCCGGGCTGAAAAAACGAGGCACTTCGCTGTCAGCGCTTTCGCGTCAG GCAGGTCTGGCGTCCTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVLRLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDAL PADMPRFVPDAELLCDYSLTLAQLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA
Sequences:
>Translated_153_residues MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVLRLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDAL PADMPRFVPDAELLCDYSLTLAQLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA >Mature_152_residues ATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVLRLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDALP ADMPRFVPDAELLCDYSLTLAQLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16646; Mature: 16515
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVLRLALCGRLAACLTLLQ CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLAQLLIGQGMQPKVEQTITG HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA HHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHCC >Mature Secondary Structure ATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVLRLALCGRLAACLTLLQ CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLAQLLIGQGMQPKVEQTITG HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA HHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA