| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is insO1 [H]
Identifier: 82543652
GI number: 82543652
Start: 1137080
End: 1137454
Strand: Direct
Name: insO1 [H]
Synonym: SBO_1134
Alternate gene names: 82543652
Gene position: 1137080-1137454 (Clockwise)
Preceding gene: 82543648
Following gene: 82543653
Centisome position: 25.16
GC content: 55.2
Gene sequence:
>375_bases GTGGTCACACTCTGCCAAGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCCTGAAAAACCAGACGG CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCATGGTTCGGCCGGAGCAAGAAGCATCGCCA CAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCACATGAAAGAGCTGGGGCTGGTCAGCTGT CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGT GACCGAGCCAAATCAGGTGTGGTGCGGTGAATGTGACCTGTATCTGGACGGGTAA
Upstream 100 bases:
>100_bases TTGAAATGGAGAATGAAATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGA AACTCAGAGCGCATTATCCT
Downstream 100 bases:
>100_bases GCGCTGGGGCGTACCTCGCCGTTGTTTCTCGACCTGTTCGCAATAAAACCAGTGGGGCTGGGGCCATGTCGTTCTCGCCG GACAGCAGGCTCACCATGAA
Product: IS911 ORF2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRHMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGECDLYLDG
Sequences:
>Translated_124_residues MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRHMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGECDLYLDG >Mature_124_residues MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRHMKELGLVSC QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGECDLYLDG
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14209; Mature: 14209
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG CCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC YQMGRWLAGRHMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGECDL HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEECCEEE YLDG EECC >Mature Secondary Structure MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG CCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC YQMGRWLAGRHMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGECDL HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEECCEEE YLDG EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]