Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82543556

Identifier: 82543556

GI number: 82543556

Start: 1039505

End: 1039708

Strand: Reverse

Name: 82543556

Synonym: SBO_1020

Alternate gene names: NA

Gene position: 1039708-1039505 (Counterclockwise)

Preceding gene: 82543557

Following gene: 82543553

Centisome position: 23.0

GC content: 53.43

Gene sequence:

>204_bases
ATGGTGGAAAGAACCATGGCATTTAAACACTATGATGTTGTCAGGGCGGCGCCGCCGTCAGATCTTGCGGAAAAGCTGAC
ACATAAACTGAAAGAGGGCTGGCAGCCGTTTGGTAGTCCGGTGGCCATAACCCCTTATACCCTGATGCAGGCGATTGCAG
CAGAAGGTGATGTGGTGGTCAGTGGTGCAACTGAGCCGGAGTGA

Upstream 100 bases:

>100_bases
TATCCATGCATATCTGCTTGATAATCAGGTTTTTATTTAAGGTATGGTTTTGTGTTTTTTCTGTATTACATGTCAGGTAT
TTTAAAGAATTATTTTTCAG

Downstream 100 bases:

>100_bases
TACTACGTCATCGTACTGGCCCGGCATTCCAGGCCATAAAAGACAGTCTGGCAGTGGGACTAAATGCACTGACGCTGACG
GATATTACCAAAAATGCAAC

Product: unknown protein encoded within prophage

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE

Sequences:

>Translated_67_residues
MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE
>Mature_67_residues
MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7284; Mature: 7284

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVV
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCEEE
SGATEPE
ECCCCCC
>Mature Secondary Structure
MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVV
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCEEE
SGATEPE
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA