| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yehK [H]
Identifier: 82543483
GI number: 82543483
Start: 970509
End: 970871
Strand: Direct
Name: yehK [H]
Synonym: SBO_0939
Alternate gene names: 82543483
Gene position: 970509-970871 (Clockwise)
Preceding gene: 82543482
Following gene: 82543485
Centisome position: 21.47
GC content: 38.29
Gene sequence:
>363_bases ATGATCGTGCAAAAAGAGCTGGTTGCTATTTACGATTATGAGGTCCCTGTACCTGAAAATCCGTTTTCCTTCAGACTTGA GATCCATAAATGCTCTGAATTATTTACAGGTTCCGTCTATCGACTGGAACGGTTCCGGCTACGTCCAACATTTCATCAAC GTGATCGAGAGGATGTTGACCCGCTAATAAATGATGCGTTGATTTATATAAGAGATGAGTTTATTGATGAGCGGAAATTA CGAGGTGAATCACCTGAACCTGTACCAGTAATTTTTAATTGTGAACTACAGAATATATTCAACCAACTAATAGAATATTA CTTTATTAAAGTGGGAAACTGGGTAATGCTGCCAACTTACTGA
Upstream 100 bases:
>100_bases AGTGAGGCGTTAAGCGCACCTGACGTCATTTTCCATTAAAAACACAGCGGGCAGTGATGCAACTGCCCGTTATCAACACG ACTTACCAGCGGGGAAAGCG
Downstream 100 bases:
>100_bases TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG CGTGGTGCGTAACGGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDVDPLINDALIYIRDEFIDERKL RGESPEPVPVIFNCELQNIFNQLIEYYFIKVGNWVMLPTY
Sequences:
>Translated_120_residues MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDVDPLINDALIYIRDEFIDERKL RGESPEPVPVIFNCELQNIFNQLIEYYFIKVGNWVMLPTY >Mature_120_residues MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDVDPLINDALIYIRDEFIDERKL RGESPEPVPVIFNCELQNIFNQLIEYYFIKVGNWVMLPTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082048, Length=105, Percent_Identity=92.3809523809524, Blast_Score=192, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14490; Mature: 14490
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDVD CCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHCCCHHEEEHEECCCCCCCCCCCCCC PLINDALIYIRDEFIDERKLRGESPEPVPVIFNCELQNIFNQLIEYYFIKVGNWVMLPTY HHHHHEEEEEEHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCC >Mature Secondary Structure MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDVD CCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHCCCHHEEEHEECCCCCCCCCCCCCC PLINDALIYIRDEFIDERKLRGESPEPVPVIFNCELQNIFNQLIEYYFIKVGNWVMLPTY HHHHHEEEEEEHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]