| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yegK [H]
Identifier: 82543446
GI number: 82543446
Start: 921752
End: 922513
Strand: Reverse
Name: yegK [H]
Synonym: SBO_0898
Alternate gene names: 82543446
Gene position: 922513-921752 (Counterclockwise)
Preceding gene: 82543447
Following gene: 82543445
Centisome position: 20.41
GC content: 50.26
Gene sequence:
>762_bases GTGAGCTGGCGTCTGGTTTATGCATCCGCTGTTGGAACATCGCACATTAGTGCTGATTTGCCTTGTCAGGATGCCTGCCA GATGCAGGTTGTCTGGTTAAACGACCAGCAACCATTACTGGTGATGTTCCTTGCTGATGGCGCAGGTAGCGTTTCGCAGG GAGGAGAAGGCGCGACGCTCGCCGTCAATGAAGCGATGGCGTTTATGGTGCAAAAAGTACAGGACGGTGAATTGGGGCTT AATGATGTCCTCGCCACAAATATGGTACTGACTATTCGTCAACGACTTTTTGCCGAGGCAGAAGCCAAAGCATTAGCAGT TCGCGATTTTGCCTGCACGTTTCTGGGATTGATTTCATCGCCTGACGGCACCTTGATTATGCAGATTGGCGATGGCGGCG TGGTGGTAGATTTGGGTCACGGTCTGCAATTGCCTCTCACGCCGATGGTGGGTGAATATGCCAACATGACGCACTTCATT ACCGACGAAGATGCCGTTTCCAGACTGGAAACTTTCACCAGCACTGGGCGTGCGCATAAAGTTGCAGCATTTACGGATGG TATTCAGCGGCTGGCGTTAAATATGCTGGATAATTCTCCTCATGTGCCTTTCTTTACCCCGTTTTTCAATGGACTGGCGT CAGTAACGCAGGAACAACTCGATTTATTACCTGAATTGTTAAAGCAGTTTTTGTCCAGCCCGGCGGTAAACGAGCGTACG GATGATGATAAAACGTTGGCACTGGCGCTGTGGTTACCATGA
Upstream 100 bases:
>100_bases GTGAACTGTTTAGCTGGTTATCCAGTTCGCTGCGTTCGGTTTCCCGCTCCACGCCGGGAACGGAAGTTGTGCTGGAAGCG CCAAAAGGCTGGACGTCAGT
Downstream 100 bases:
>100_bases AACCCACTTTATATACTGCTACTGGTGAGTGCGTTACGCCAGGCCGTGAACTGGGCAAAGGCGGTGAAGGCGCGGTTTAT GATATCGAGGAGTTTGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFLADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGL NDVLATNMVLTIRQRLFAEAEAKALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQEQLDLLPELLKQFLSSPAVNERT DDDKTLALALWLP
Sequences:
>Translated_253_residues MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFLADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGL NDVLATNMVLTIRQRLFAEAEAKALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQEQLDLLPELLKQFLSSPAVNERT DDDKTLALALWLP >Mature_252_residues SWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFLADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGLN DVLATNMVLTIRQRLFAEAEAKALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFIT DEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQEQLDLLPELLKQFLSSPAVNERTD DDKTLALALWLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788387, Length=251, Percent_Identity=94.4223107569721, Blast_Score=489, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27299; Mature: 27167
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFLADGAGSVSQGGEGATL CCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEE AVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEAKALAVRDFACTFLGLISS EHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFITDEDAVSRLETFTSTGRAHK CCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEE VAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQEQLDLLPELLKQFLSSPAVNERT HHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDDKTLALALWLP CCCCEEEEEEECC >Mature Secondary Structure SWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFLADGAGSVSQGGEGATL CEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEE AVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEAKALAVRDFACTFLGLISS EHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFITDEDAVSRLETFTSTGRAHK CCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEE VAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQEQLDLLPELLKQFLSSPAVNERT HHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDDKTLALALWLP CCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]