| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yegI [H]
Identifier: 82543445
GI number: 82543445
Start: 919833
End: 921755
Strand: Reverse
Name: yegI [H]
Synonym: SBO_0897
Alternate gene names: 82543445
Gene position: 921755-919833 (Counterclockwise)
Preceding gene: 82543446
Following gene: 82543443
Centisome position: 20.39
GC content: 51.85
Gene sequence:
>1923_bases ATGAAACCCACTTTATATACTGCTACTGGTGAGTGCGTTACGCCAGGCCGTGAACTGGGCAAAGGCGGTGAAGGCGCGGT TTATGATATCGAGGAGTTTGTCGATAGCGTCGCCAAGATTTATCACACGCCGCCACCCGCCTCAAAACAGGACAAACTTG CCTTTATGGCTGCGACAGCTGACGCGCAGTTGTTGAATTATGTCGCCTGGCCGCAGGCAACGCTTCACGGTGGACGAGGC GGAAAAGTTATCGGTTTTATGATGCCAAAAGTTTCTGGTAAAGAACCGATTCATATGATCTATAGCCCGGCACATCGTCG CCAGAGTTACCCTCATTGTGCGTGGGATTTTCTACTCTATGTTGCGCGCAATATTGCTTCATCTTTTGCTACGGTTCACG AGCACGGGCACGTCGTGGGTGACGTAAACCAGAACAGTTTTATGGTAGGTCGCGACAGCAAAGTGGTACTGATTGATAGC GACTCCTTTCAGATTAACGTCAATGGCACACTGCATTTATGCGAAGTCGGCGTGTCGCATTTTACGCCGCCAGAGCTACA AACCTTGTCGTCATTTGTCGGCTTTGAACGCACAGAAAATCACGATAATTTTGGCCTTGCGTTGCTGATTTTTCACGTCT TGTTTGGTGGCCGGCATCCTTATTCTGGTGTGCCGCTTATCTCTGATGCGGGTAATGCGCTGGAGACGGATATTACCCAT TTCCGTTATGCCTACGCGTCAGATAATCAGCGACGTGGTTTAAAACCGCCGCCACGATCGATTCCGCTATCGATGTTACC GAGTGATGTTGAAGCCATGTTTCAGCAGGCATTCACGGAAAGTGGCGTGGCAACCGGGCGTCCGACGGCTAAAGCGTGGG TAGCGGCACTTGATTCTCTGCGCCAACAGTTAAAGAAATGTCCCGTTTCGGCAATGCATGTTTATCCCGCTCATTTGACC GACTGCCCGTGGTGTACGCTGGATAATCAAGGCGTTATCTATTTTGTTGATCTCGGTGAAGAGGTCATTACCACCAGCGG TGATTTTGTGCTGGCGAAAGTCTGGGCGATGGTGATGGCGTCAGTAGCACCGCCAGCATTGCAATTGCCATTACCCGATC ATTTCCAACCGACTGGCAGGCCGCTTCCTTTAGGCCTGTTACGGCGCGAATACATCATTCTGATTGAGATCGCACTGTCA GCGTTATCGCTGTTGCTTTGCGGCCTTCAGGCAGAACCGCGTTATATTATTTTGGTTCCTGTGCTGTCGGCTATCTGGAT TATTGGCAGTCTGACAAGCAAAGCGTACAAAGCAGAAATCCAGCAACGCCGTGAGGCATTTAATCGCGCGAAAATGGACT ATGAGCATTTAGTCAGCCAGATCCAACAGTTGGGCGGGCTGGAAGGTTTTATCGCCAAACGGGCGATGCTCGAAAAAATG AAGGACGAAATTCTCGGGTTACCGGAAGAGGAGAAACGCGCTCTGGCAGCACTTTATGACACCGCAAGGGAACGGCAGAA GCAGAAGTTTCTGGAGGGATTTTTTGCCTCTATTCCCGGCGTTGGCCCTGCGCGTAAAGCGGCGTTACGGTCTTTTGGTA TTGAAACAGCAGCGGATGTTACCCGTCGTGGCGTTAAGCAAGTTAAAGGGTTTGGCGACCATCTGACCCAGGCGGTTATC GACTGGAAAGCGAGCTGTGACCGCCGTTTTGTGTTCAGGCCGAACGAAGCGGTAACGCCAGCAGACAGACAGGCGGTAAT GGCCGCCAAACGACATCGGCTGGAATCGGCGTTGACTGTCGGCGCGACAGAGTTGCAGCGATTCCGCCTTTATGCTCCAG CACGGACCATGCCGTTGATGGAACCGTTACGTCAGGCGGCAGAAAAACTGGCTCAGGCGCAGGCAGATTTAAGCCGCTGC TGA
Upstream 100 bases:
>100_bases TCGATTTATTACCTGAATTGTTAAAGCAGTTTTTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTG GCACTGGCGCTGTGGTTACC
Downstream 100 bases:
>100_bases GCCATTTTCTTTTAACGAAATACCACTTCCGCCCAGCGTGCCAGCCCGGCGGTGACGGAGCCAAAGTCATCGCCGCCTGC AATCGGAATGCCCGGCAACT
Product: chaperonin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRG GKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLT DCPWCTLDNQGVIYFVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALS ALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYEHLVSQIQQLGGLEGFIAKRAMLEKM KDEILGLPEEEKRALAALYDTARERQKQKFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVI DWKASCDRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLRQAAEKLAQAQADLSRC
Sequences:
>Translated_640_residues MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRG GKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLT DCPWCTLDNQGVIYFVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALS ALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYEHLVSQIQQLGGLEGFIAKRAMLEKM KDEILGLPEEEKRALAALYDTARERQKQKFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVI DWKASCDRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLRQAAEKLAQAQADLSRC >Mature_640_residues MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRG GKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLT DCPWCTLDNQGVIYFVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALS ALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYEHLVSQIQQLGGLEGFIAKRAMLEKM KDEILGLPEEEKRALAALYDTARERQKQKFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVI DWKASCDRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLRQAAEKLAQAQADLSRC
Specific function: Unknown
COG id: COG4248
COG function: function code R; Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788385, Length=642, Percent_Identity=95.1713395638629, Blast_Score=1245, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR016960 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70685; Mature: 70685
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPASKQDKLAFMAATA CCCCEEECCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECH DAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLY HHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHH VARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINVNGTLHLCEVGVSH HHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEECCCEEEEECCEEEEEECCHHH FTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSL HEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH RQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIYFVDLGEEVITTSGDFVLAKVWAMVMA HHHHHHCCCHHEEECCCCCCCCCCEEECCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHH SVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALSALSLLLCGLQAEPRYIILVP HCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH VLSAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYEHLVSQIQQLGGLEGFIAKRAMLEKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH KDEILGLPEEEKRALAALYDTARERQKQKFLEGFFASIPGVGPARKAALRSFGIETAADV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH TRRGVKQVKGFGDHLTQAVIDWKASCDRRFVFRPNEAVTPADRQAVMAAKRHRLESALTV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH GATELQRFRLYAPARTMPLMEPLRQAAEKLAQAQADLSRC CHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPASKQDKLAFMAATA CCCCEEECCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECH DAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLY HHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHH VARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINVNGTLHLCEVGVSH HHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEECCCEEEEECCEEEEEECCHHH FTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSL HEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH RQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIYFVDLGEEVITTSGDFVLAKVWAMVMA HHHHHHCCCHHEEECCCCCCCCCCEEECCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHH SVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALSALSLLLCGLQAEPRYIILVP HCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHH VLSAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYEHLVSQIQQLGGLEGFIAKRAMLEKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH KDEILGLPEEEKRALAALYDTARERQKQKFLEGFFASIPGVGPARKAALRSFGIETAADV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH TRRGVKQVKGFGDHLTQAVIDWKASCDRRFVFRPNEAVTPADRQAVMAAKRHRLESALTV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH GATELQRFRLYAPARTMPLMEPLRQAAEKLAQAQADLSRC CHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]