| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is wbdE
Identifier: 82543415
GI number: 82543415
Start: 879345
End: 880187
Strand: Reverse
Name: wbdE
Synonym: SBO_0864
Alternate gene names: NA
Gene position: 880187-879345 (Counterclockwise)
Preceding gene: 82543416
Following gene: 82543414
Centisome position: 19.47
GC content: 27.05
Gene sequence:
>843_bases ATGGAGAATACTAATTATTATAAGTTAGCTATCTTAATTGTACTTTATGGAAAAGAAGTAGAACAGTGTGAAACATTTAC TCATATAGATAGAGTTCTAAAAAAAAATAGGATGTCAAAGGATGATATTATTCTGTGTCTTTGGAATAATGGCCCAAGAG AAATCGCATTTAATCTGACTACAGATTACTATACCTTAAAAGTTTGTCAAACAATAAATAATGAATCATTAAGTTATATA TATAATTTATTTATTAATGAGGTGGAGTCAGAAAAATATATTTTACTAGATCATGATTCCATATTGAAATATGATTATGT TTTGGAATGTCTTAATTCTACATCTGATTGTATCATTCCTAATATAATAGTAGGAAACAATATTCAAAGTCCTAAAACAT ATAGCATTCAATCGTTTAACAAGGGAAATACAGTGCTTGCTATTGGGAGTGGAATTTGTATATCTAAAAAATTATGTGAG AAACTTCGACAAGTATTTGGTGATGTTTTTGATTCTAGGTTTTATTTTTATGGTGTTGATTCAACTTTTTTTCTACGGCT GAATAAAATTGGGGAAAGTGAGTTTATAAAAATCAGTGAGTGCGTTGTATTGCATTCATTGTCTAGACTAGAAAATGAAG CTATAAAAGTAAAGCAATTTAGAATTAAAGAAAGAAGTTATGATCAAGGATTAACATTAAGATATTATTTCTGTAAATTT ACGTTTTTTACTGTCGCAAAAAAACTTCTTGCGAAGTTGATTTTTAATAAAAGTGATATAAGTTTAATATATTTTGCAAA AGCATATTTTAGCGGTAAGCATTATAAGAGCGGTAAATCATGA
Upstream 100 bases:
>100_bases ATTGACGTAAAGTGGCCTTTAAGTATCCATAAACCGATTTTATCTATAAAAGATGAAAAACAAAAGATGTTTAAAGAAAT GATAGCGTTGGAGAAATGGA
Downstream 100 bases:
>100_bases AGTTTATTATTATTGGCTATAGAGATGCGTATTTTTGGAATGAATATGGGACATCTGTTAGAGATTTACAAATTGCAGAA ATTCTATCTAGAAAGTATCA
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MENTNYYKLAILIVLYGKEVEQCETFTHIDRVLKKNRMSKDDIILCLWNNGPREIAFNLTTDYYTLKVCQTINNESLSYI YNLFINEVESEKYILLDHDSILKYDYVLECLNSTSDCIIPNIIVGNNIQSPKTYSIQSFNKGNTVLAIGSGICISKKLCE KLRQVFGDVFDSRFYFYGVDSTFFLRLNKIGESEFIKISECVVLHSLSRLENEAIKVKQFRIKERSYDQGLTLRYYFCKF TFFTVAKKLLAKLIFNKSDISLIYFAKAYFSGKHYKSGKS
Sequences:
>Translated_280_residues MENTNYYKLAILIVLYGKEVEQCETFTHIDRVLKKNRMSKDDIILCLWNNGPREIAFNLTTDYYTLKVCQTINNESLSYI YNLFINEVESEKYILLDHDSILKYDYVLECLNSTSDCIIPNIIVGNNIQSPKTYSIQSFNKGNTVLAIGSGICISKKLCE KLRQVFGDVFDSRFYFYGVDSTFFLRLNKIGESEFIKISECVVLHSLSRLENEAIKVKQFRIKERSYDQGLTLRYYFCKF TFFTVAKKLLAKLIFNKSDISLIYFAKAYFSGKHYKSGKS >Mature_280_residues MENTNYYKLAILIVLYGKEVEQCETFTHIDRVLKKNRMSKDDIILCLWNNGPREIAFNLTTDYYTLKVCQTINNESLSYI YNLFINEVESEKYILLDHDSILKYDYVLECLNSTSDCIIPNIIVGNNIQSPKTYSIQSFNKGNTVLAIGSGICISKKLCE KLRQVFGDVFDSRFYFYGVDSTFFLRLNKIGESEFIKISECVVLHSLSRLENEAIKVKQFRIKERSYDQGLTLRYYFCKF TFFTVAKKLLAKLIFNKSDISLIYFAKAYFSGKHYKSGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32606; Mature: 32606
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTNYYKLAILIVLYGKEVEQCETFTHIDRVLKKNRMSKDDIILCLWNNGPREIAFNLT CCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE TDYYTLKVCQTINNESLSYIYNLFINEVESEKYILLDHDSILKYDYVLECLNSTSDCIIP CCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC NIIVGNNIQSPKTYSIQSFNKGNTVLAIGSGICISKKLCEKLRQVFGDVFDSRFYFYGVD EEEECCCCCCCCEEEEEECCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCEEEEECC STFFLRLNKIGESEFIKISECVVLHSLSRLENEAIKVKQFRIKERSYDQGLTLRYYFCKF CEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHEEHHHEEECCCCCCCCCEEEEHHHHH TFFTVAKKLLAKLIFNKSDISLIYFAKAYFSGKHYKSGKS HHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCC >Mature Secondary Structure MENTNYYKLAILIVLYGKEVEQCETFTHIDRVLKKNRMSKDDIILCLWNNGPREIAFNLT CCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE TDYYTLKVCQTINNESLSYIYNLFINEVESEKYILLDHDSILKYDYVLECLNSTSDCIIP CCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC NIIVGNNIQSPKTYSIQSFNKGNTVLAIGSGICISKKLCEKLRQVFGDVFDSRFYFYGVD EEEECCCCCCCCEEEEEECCCCCEEEEECCCCEECHHHHHHHHHHHHHHHHCCEEEEECC STFFLRLNKIGESEFIKISECVVLHSLSRLENEAIKVKQFRIKERSYDQGLTLRYYFCKF CEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHEEHHHEEECCCCCCCCCEEEEHHHHH TFFTVAKKLLAKLIFNKSDISLIYFAKAYFSGKHYKSGKS HHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA