| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yliJ [H]
Identifier: 82543289
GI number: 82543289
Start: 751846
End: 752424
Strand: Reverse
Name: yliJ [H]
Synonym: SBO_0734
Alternate gene names: 82543289
Gene position: 752424-751846 (Counterclockwise)
Preceding gene: 82543290
Following gene: 82543287
Centisome position: 16.65
GC content: 53.37
Gene sequence:
>579_bases TTGCTGACGCTCGAAGAACTGGAACTACCTTATGAGCAAATTCTCGCGGGCCGTGAGTTTGGGATAAATCACGATGCTGA TTTTCTGGCGATGAACCCTAACGGGCTGGTGCCGTTGTTGCGTGACGACGAAAGTGATCTCATTCTTTGGGAATCAAACG CCATTGTCCGCTATCTGGCGGCACAGTACGGGCAAAAACGCCTGTGGATCGACTCACCGGCACGTCGTGCGGAAGCGGAA AAATGGATGGACTGGGCAAACCAGACGCTCAGTAATGCCCATCGAGGGATCCTGATGGGATTAGTCAGAACACCACCGGA AGAGCGCGATCAGGCCGCCATTGATGCCAGTTGCAAAGAGTGCGACGCCCTGTTTGCCCTGCTCGATGCGGAACTGGCAA AAGTAAAATGGTTCTCTGGCGACGAGTTTGGTGTGGGCGATATCGCTATCGCACCGTTCATCTACAATTTGTTTAACGTT GGCCTGACCTGGACACCGCGTCCAAATCTGCAACGCTGGTATCAGCAACTCACTGAACGCCCCGCAGTGCGCAAAGTGGT GATGATTCCCGTTAGCTAA
Upstream 100 bases:
>100_bases TCACCATCGGAGTCCTGTTCAGCCTGTGGCTGCCTGTCGGAAAAGGGGTGAGTATGATTACGCTGTGGGGTCGGAATAAT TCAACCAACGTAAAAAAGTA
Downstream 100 bases:
>100_bases TTGCGTGGGCTAACTTTAAGTAATTCCCCACTGGACTCGTCGGTGAGAACGTATAAATAACCGTCGGGTCCAGTGCGAAC ATCACGAATTCGCTGCCCTC
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAE KWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
Sequences:
>Translated_192_residues MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAE KWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS >Mature_192_residues MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAE KWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=192, Percent_Identity=99.4791666666667, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI87082195, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI20130115, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 21888; Mature: 21888
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLA CCCHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCHHHHHHH AQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKE HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHH CDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTER HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCC PAVRKVVMIPVS HHHEEEEEEECC >Mature Secondary Structure MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLA CCCHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCHHHHHHH AQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKE HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHH CDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTER HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCC PAVRKVVMIPVS HHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]