| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543204
Identifier: 82543204
GI number: 82543204
Start: 655961
End: 656299
Strand: Direct
Name: 82543204
Synonym: SBO_0643
Alternate gene names: NA
Gene position: 655961-656299 (Clockwise)
Preceding gene: 82543203
Following gene: 82543205
Centisome position: 14.51
GC content: 55.16
Gene sequence:
>339_bases ATGCTGTTCGGTACCCGTTCTGAAAAACTGCGTCGTGAAGTTGAACAGGCTGAGGCCCTGCTGAAACAACGCGAACAGGA CAGTGATCGTTACAGTGGGCGGGAAGACGATCCGCAGGTTCCCCGCCAGTTGCGACAGTCTCGTCATCGTCGCCCGTTAC CGGAGCATCTGCCCCGCGAAATAAATCGCCTGGAGCCAGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTAT CTGGGGGAAGTCAGCGCAGAACAACTGGAACTGGTGAGCAGCGCTCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGC CTGTACAAAATGTGACTGA
Upstream 100 bases:
>100_bases GGCCTTCCTGCGCTCTGCACTGGCCCGCGCCGAAGAAAAGATCGAAGAAGATGAACGGGAAATAGAACATCTGCGGGCTC AGATAGAAAAACTGCGCCGG
Downstream 100 bases:
>100_bases ATCGTTGAAGCACCGGCACCATCCCGTCCGATAGAGCGTGGTATCGCGGGCCCGGGGTTACTTGCCCGCGTGTTAACGGG AAAATACTGCGAACACCTGC
Product: protein encoded within IS
Products: NA
Alternate protein names: IS66 Family Element Transposase
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDY LGEVSAEQLELVSSALKVIRTERVKKACTKCD
Sequences:
>Translated_112_residues MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDY LGEVSAEQLELVSSALKVIRTERVKKACTKCD >Mature_112_residues MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDY LGEVSAEQLELVSSALKVIRTERVKKACTKCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13034; Mature: 13034
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPRE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH INRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCD HHHCCCHHHCCHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPRE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH INRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCD HHHCCCHHHCCHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA