Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is 82543202

Identifier: 82543202

GI number: 82543202

Start: 653855

End: 654565

Strand: Direct

Name: 82543202

Synonym: SBO_0641

Alternate gene names: NA

Gene position: 653855-654565 (Clockwise)

Preceding gene: 82543201

Following gene: 82543203

Centisome position: 14.47

GC content: 51.2

Gene sequence:

>711_bases
ATGAGTTTTTCTTTCGATAATATTTCCCTGAATAACTTTTCGCTCAGTGAAAGTAACGTACTGAGTGCAGTTCGTGGCGG
CGGTGTCCTGGGACTCATTAATAGTGTACTGGCACCGTCATTCGGTATTTATTACGCACGGAATGATCCGGCAGGTGCCC
ATCAGAAGGGTGGCAAACCTTTCTCCCCGGATTCTTTTGTTGTCGTTGAGGTGGGCGCGGAGGCTTCTGTTTCCACCGTC
CCCGTGGAGCAGGGGGCTTATACCACCTTTAATAAAATCCAGAGATCGCCGGAACTGCATGTGACTTTCATTGTAGAGGG
GTGGACGGCCTTTTCCGGATCCGTCCCGAACCTGACAAATTTTTCCACCACCTCGCGGACGAATGTGCTGGAAACGCTTG
AAAGGATGCGTACCACGGCAGGACTCTACGATATTGAGACGCCGGACAAGACATGGACATCCTGCGACCTTGTGAAATAT
GACTACCGAATGCGAAGTAATAATGGTCCGACCTTACTGACGGTTACTGCGGTATTTCAGACCGTAATGAATACAGGAGA
GGTGTCAGTGGGAAGTACGGATAAGTCGTCTCCCACGGACAACGATAAAGCAAAAGGGGCCGCATCGGTTAAAACGCAGC
CAGTTACGGCGTCGGTGACACAACCGTCAGACGCTGACAGACGAAGTGCCACGAACAGGGGGATCACCTGA

Upstream 100 bases:

>100_bases
TCACCACAACGTCGGACAATGTGAAGGGTATTACCGATGACGCACGTCGGCGTATCACGAATTCGGCGCTTGTGTCGGTT
TATTCCAGCGGGGTAACAGG

Downstream 100 bases:

>100_bases
TGCTGGAAATTGTTTTATCTCCCGTTAAAGCCCAGCAGTTTACGGTGACACTGGGCGCTCAGGTCTGCACCATTCGCCTG
AATCAGCGTACTACGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIYYARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTV
PVEQGAYTTFNKIQRSPELHVTFIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTASVTQPSDADRRSATNRGIT

Sequences:

>Translated_236_residues
MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIYYARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTV
PVEQGAYTTFNKIQRSPELHVTFIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTASVTQPSDADRRSATNRGIT
>Mature_235_residues
SFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIYYARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTVP
VEQGAYTTFNKIQRSPELHVTFIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKYD
YRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTASVTQPSDADRRSATNRGIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25239; Mature: 25108

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIYYARNDPAGAHQKGGKP
CCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCC
FSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVTFIVEGWTAFSGSVPNLTN
CCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEEECEEECCCCCCCCCC
FSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKYDYRMRSNNGPTLLTVTAVFQ
CCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHH
TVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTASVTQPSDADRRSATNRGIT
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
SFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIYYARNDPAGAHQKGGKP
CCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCC
FSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVTFIVEGWTAFSGSVPNLTN
CCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEEECEEECCCCCCCCCC
FSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKYDYRMRSNNGPTLLTVTAVFQ
CCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHH
TVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTASVTQPSDADRRSATNRGIT
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA