| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yuaL [H]
Identifier: 82543195
GI number: 82543195
Start: 649520
End: 649729
Strand: Direct
Name: yuaL [H]
Synonym: SBO_0634
Alternate gene names: 82543195
Gene position: 649520-649729 (Clockwise)
Preceding gene: 82543192
Following gene: 82543197
Centisome position: 14.37
GC content: 52.38
Gene sequence:
>210_bases ATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAG TATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG TGGTGGGTTACGTAAGCTTCAGCGAGGCGGTAATGACTCCAACTTACTGA
Upstream 100 bases:
>100_bases TCTTTCTCAGGAAGTTTAGTCTCCAGGATTCCCGGGGCGGTTCACACCATGAAAGCGCTGGAAATGGCATGGGAAACCCC GTGGTAAGCCCGGCGGGGTG
Downstream 100 bases:
>100_bases TAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCC CAGCCTTGCCAGATGTTGTC
Product: IS911 ORF2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAVMTPTY
Sequences:
>Translated_69_residues MFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAVMTPTY >Mature_69_residues MFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAVMTPTY
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8447; Mature: 8447
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH SEAVMTPTY HHHHCCCCC >Mature Secondary Structure MFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH SEAVMTPTY HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA