| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is citX [H]
Identifier: 82543062
GI number: 82543062
Start: 497987
End: 498475
Strand: Reverse
Name: citX [H]
Synonym: SBO_0479
Alternate gene names: 82543062
Gene position: 498475-497987 (Counterclockwise)
Preceding gene: 82543063
Following gene: 82543061
Centisome position: 11.03
GC content: 59.1
Gene sequence:
>489_bases ATGCACCTGCTTCCTGAACTCGCCAGCCACCATGCGGTGTCAATTCCCGAGCTGCTCGTCAGCCGGGATGAAAGGCAAGC ACGGCAACACGTCTGGCTCAAGCGCCATCCTGTTCCACTGGTCTCCTTTACCGTGGTTGCGCCTAGGCCGATTAAAGACA GTGAGGTCACACGCCGAATTTTTAATCATGGCGTGACAGCCTTGCGTGCCTTAGCCGCAAAACAGGGCTGGCAAATTCAG GAGCAGGCTGCACTGGTTTCCGCCAGCGGGCCGGAGGGTATGTTGAGCATTGCCGCCCCGGCTCGCGACCTCAAGCTCGC CACCATTGAGCTTGAACATAGTCATCCTCTCGGGCGGTTATGGGATATCGATGTCCTGACGCCCGAAGGCGAAATTCTCT CCCGCCGCGACTATTCACTGCCGCCTCGCCGCTGCCTGTTGTGCGAGCAAAGCGCAGCCGTCTGCGCGCGTGGAAAACCC ATCAACTGA
Upstream 100 bases:
>100_bases TGAACCACAGCCGATTGAATTCACCGACCGCGTCGTTGCCGTTGTGCGTTACCGCGATGGCTCGGTGATCGATGTTGTAC ATCAGGTGAAGGAATAAGCC
Downstream 100 bases:
>100_bases CCGATTTACTCAACCGCATGGAGGCACTGCTGAACGATGTCGATGCCTGCAACGTCAACTAAAACCACAAAGCTTGCGAC GTCATTAATCGATGAGTACG
Product: 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyase
Products: NA
Alternate protein names: Apo-ACP nucleodityltransferase; Holo-ACP synthase; Holo-citrate lyase synthase [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPRPIKDSEVTRRIFNHGVTALRALAAKQGWQIQ EQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKP IN
Sequences:
>Translated_162_residues MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPRPIKDSEVTRRIFNHGVTALRALAAKQGWQIQ EQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKP IN >Mature_162_residues MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPRPIKDSEVTRRIFNHGVTALRALAAKQGWQIQ EQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKP IN
Specific function: Transfers 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A on a serine residue to the apo-acyl carrier protein (gamma chain) of the citrate lyase to yield holo-acyl carrier protein [H]
COG id: COG3697
COG function: function code HI; Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitX family [H]
Homologues:
Organism=Escherichia coli, GI1786831, Length=159, Percent_Identity=99.3710691823899, Blast_Score=318, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005551 [H]
Pfam domain/function: PF03802 CitX [H]
EC number: =2.7.7.61 [H]
Molecular weight: Translated: 17999; Mature: 17999
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPRPIKDSEVTRRI CCCCHHHHCCCCCCCHHHHHCCCHHHHHHCCHHHCCCCCEEEEEEECCCCCCHHHHHHHH FNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRL HHCCHHHHHHHHHHCCCCCHHHHHEEECCCCCCEEEECCCCCCEEEEEEEEECCCCCCCE WDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKPIN EEEEEECCCCCEECCCCCCCCHHHEEEECCCCHHHCCCCCCC >Mature Secondary Structure MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPRPIKDSEVTRRI CCCCHHHHCCCCCCCHHHHHCCCHHHHHHCCHHHCCCCCEEEEEEECCCCCCHHHHHHHH FNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRL HHCCHHHHHHHHHHCCCCCHHHHHEEECCCCCCEEEECCCCCCEEEEEEEEECCCCCCCE WDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKPIN EEEEEECCCCCEECCCCCCCCHHHEEEECCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA