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The map label for this gene is ybbD [H]

Identifier: 82542993

GI number: 82542993

Start: 421931

End: 422353

Strand: Direct

Name: ybbD [H]

Synonym: SBO_0403

Alternate gene names: 82542993

Gene position: 421931-422353 (Clockwise)

Preceding gene: 82542992

Following gene: 82542997

Centisome position: 9.34

GC content: 32.62

Gene sequence:

>423_bases
ATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTATTTTTGCTATTATAATCATTGTTGTTTTATGCGTAAT
TACTTATCTTTATTTATACAAAGATGAATCTCTTGTAAGTAAACATTACATAAACTATATGGCAATACCAGAAAATGATG
GAGTTTTTACATGGCTCCCAGATTTTTTTTCGCACGTAGCGGTGGATATATCAATATACACAAATGTAGAAGATGATTAT
TTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGT
GGCGAAAATCGTATCAAAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATG
GTGTAAACCTTTTTTGTTGGTGA

Upstream 100 bases:

>100_bases
AATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATAAAAA
AACGATAAAGGCTTTACAAG

Downstream 100 bases:

>100_bases
AATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTTGTGCAGAGTAATTGCTTGAATTAA
GAGTCTATCCCATATCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDY
FFSYFSLTNDDGGRFKKTLTVRAREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFCW

Sequences:

>Translated_140_residues
MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDY
FFSYFSLTNDDGGRFKKTLTVRAREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFCW
>Mature_140_residues
MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDY
FFSYFSLTNDDGGRFKKTLTVRAREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16121; Mature: 16121

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEECCCCCEEEEHH
DFFSHVAVDISIYTNVEDDYFFSYFSLTNDDGGRFKKTLTVRAREQVAKIVSKNDPDTKK
HHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCEEHEEHHHHHHHHHHHHCCCCCCHHH
VWCKYGKIPGQGDGVNLFCW
HHHCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEECCCCCEEEEHH
DFFSHVAVDISIYTNVEDDYFFSYFSLTNDDGGRFKKTLTVRAREQVAKIVSKNDPDTKK
HHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCEEHEEHHHHHHHHHHHHCCCCCCHHH
VWCKYGKIPGQGDGVNLFCW
HHHCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766878; 9278503 [H]