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The map label for this gene is ybbM [H]

Identifier: 82542985

GI number: 82542985

Start: 410378

End: 411184

Strand: Direct

Name: ybbM [H]

Synonym: SBO_0393

Alternate gene names: 82542985

Gene position: 410378-411184 (Clockwise)

Preceding gene: 82542984

Following gene: 82542987

Centisome position: 9.08

GC content: 46.59

Gene sequence:

>807_bases
ATGCCGGAGAAATGCAGGAAGCACGCTATGAACTCGCATAATATTACTAACGAATCATTGGCACTGGCATTAATGCTGGT
GGTGGTGGCAATCTTAATTAGCCATAAAGAAAAACTGGCGCTGGAGAAAGATATTTTCTGGAGCGTCGGGCGCGCGATAA
TTCAGCTGATTATTGTCGGCTATGTGCTGAAGTATATTTTCAGCGTGGATGATGCCAGCCTGACATTATTGATGGTGTTA
TTTATCTGCTTTAATGCGGCGTGGAACGCGCAAAAACGCAGTAAATATATTGCTAAAGCTTTTATCTCATCGTTTATTGC
CATTACGGTTGGGGCGGGAATTACCCTGGCGGTGCTGATTCTCTCAGGGTCGATTGAATTTATCCCGATGCAGGTGATCC
CTATCGCCGGGATGATTGCCGGTAACGCCATGGTAGCGGTGGGGTTGTGTTACAACAATTTAGGGCAACGGGTCATTAGC
GAACAGCAACAGATTCAGGAGAAACTGAGTCTTGGCGCGACGCCGAAGCAGGCTTCAGCGATATTGATTCGCGACAGTAT
TCGCGCGGCTTTAATTCCGACGGTCGATTCAGCAAAAACGGTTGGCTTAGTGAGTTTACCAGGAATGATGTCCGGGCTGA
TATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTG
TCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAA
GAAATGA

Upstream 100 bases:

>100_bases
ATCCATCGTTATGTGCGCGAGCAAAATATTGCCGTGCTGTGGGTGACACACGATAAAGACGAAATTAATCATGCGGATAA
AGTGATTACACTGCAACCGC

Downstream 100 bases:

>100_bases
TGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGAACAACGGAATATCAATACAACAATGCATA
CAGCTGGCGGCGATACTTCG

Product: metal resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVL
FICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVIS
EQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASL
STIIACYLTYRKFYNSRHQLVVTQLKKK

Sequences:

>Translated_268_residues
MPEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVL
FICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVIS
EQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASL
STIIACYLTYRKFYNSRHQLVVTQLKKK
>Mature_267_residues
PEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVLF
ICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISE
QQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLS
TIIACYLTYRKFYNSRHQLVVTQLKKK

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=259, Percent_Identity=99.6138996138996, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29281; Mature: 29149

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVG
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLI
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASA
HHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHE
ILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASL
EEEHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
STIIACYLTYRKFYNSRHQLVVTQLKKK
HHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
PEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVG
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLI
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASA
HHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHE
ILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASL
EEEHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
STIIACYLTYRKFYNSRHQLVVTQLKKK
HHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]