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The map label for this gene is 82542937

Identifier: 82542937

GI number: 82542937

Start: 359485

End: 360504

Strand: Direct

Name: 82542937

Synonym: SBO_0343

Alternate gene names: NA

Gene position: 359485-360504 (Clockwise)

Preceding gene: 82542936

Following gene: 82542938

Centisome position: 7.95

GC content: 51.08

Gene sequence:

>1020_bases
ATGAAATATACACCGGTTGGCGTTGATATCGCAAAACATGTCATTCAGATTCACTTCATCAATGAGCACACAGGTGAAGT
GGTTGATAAACAGTTGCGTAGACAGGATTTTCTGACGTTCTTCGGCAACCGTGAGCCATGCCTGATTGGTATGGAGGCCT
GTGGAGGTTCTCAGCACTGGGCACGGGAACTGACAAAACTTGGTCATAAAGTCCGGTTGTTGCAGGCCCGCTTCGTTAAG
GCATTCGTCATGGGCAATAAGAATGATGTGATGGATGCCCGGGCTATCTGGATGGCGGTTCAGCAGCCGGGTAAAGAAAT
CGCCGTAAAAACAGAAGAACAGCAGTCGGTACTGGTTCTGCACCGTACCCGCATGCAACTGGTGAAGTTCCGGACCGCAC
AAATTAATGCCCTGCACGGGACGTTACTGGAGTTTGGTGAAACCATCCACAAAGGCCGGGCAGCGATGGAGCGGGAGTTC
CCCGAAGCACTGGAACGGATGAAAGAGAGACTGCCACCGTATCTCATTATGGTTCTGGAAAACCAGTACAACCGACTGAA
TGAGCTGGACTCACTGATAGAGGATATTGAAAAACAGCTTACCAGCGTGGCGAGGCAGAATGAAACCTGTAAGCGGTTGC
TGGATATTCCTGGCGTTGGACCACTTATTGCGACGGCAGCGGTGGCCACCATGGGGGAAGCATCAGCGTTTAAATCGGGG
CGAGAGTTCGCCGCATATGTTGGTCTGGTTCCAAAACAAACTGGCTCCGGAGGGAAAGTACGTCTGCTGGGGATAAGCAA
ACGTGGTGACACTTATCTCAGGACATTATTTATCCACGGTGCAAGAGCGGTGGCATTAGTAGCTAAAGAGCCTGGCCCGT
GGATAACCGAACTGAAAAAACGTCGTCCAGCCAGTGTGGCAATCGTCGCCATGGCAAACAAGCTGGCACGAACAGTATGG
GCGATAACCGCCCATGACCGTAAGTATGACAGGAACCACGTCAGTATCAGACCATATTAA

Upstream 100 bases:

>100_bases
TAAAAGGGTGAAACTGGCAGGTGTGGAGCCTCGCAGATTTCCGGCATCATAGTGCCCAATACGGGATGCATAAAGCTCCC
TCAGACTGGAGACTCCACAA

Downstream 100 bases:

>100_bases
TCGCTGATACCATTAAACAATGAACTCTTAACAAAAGGGTGAATGCTGAAAGGTTGCTATGGCGGCCAGAGTGATGACAA
AGACAGGTAAGACCGTGACT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNREPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVK
AFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREF
PEALERMKERLPPYLIMVLENQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSG
REFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKKRRPASVAIVAMANKLARTVW
AITAHDRKYDRNHVSIRPY

Sequences:

>Translated_339_residues
MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNREPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVK
AFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREF
PEALERMKERLPPYLIMVLENQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSG
REFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKKRRPASVAIVAMANKLARTVW
AITAHDRKYDRNHVSIRPY
>Mature_339_residues
MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNREPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVK
AFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREF
PEALERMKERLPPYLIMVLENQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSG
REFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKKRRPASVAIVAMANKLARTVW
AITAHDRKYDRNHVSIRPY

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38197; Mature: 38197

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNREPCLIGMEACGGSQHW
CCCCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHH
ARELTKLGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
HRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLIMVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
NQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCC
REFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKK
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
RRPASVAIVAMANKLARTVWAITAHDRKYDRNHVSIRPY
CCCCCEEHHHHHHHHHHHHHEEEECCCCCCCCCEEECCC
>Mature Secondary Structure
MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNREPCLIGMEACGGSQHW
CCCCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHH
ARELTKLGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
HRTRMQLVKFRTAQINALHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLIMVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
NQYNRLNELDSLIEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCC
REFAAYVGLVPKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKK
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
RRPASVAIVAMANKLARTVWAITAHDRKYDRNHVSIRPY
CCCCCEEHHHHHHHHHHHHHEEEECCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]