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The map label for this gene is yagY

Identifier: 82542826

GI number: 82542826

Start: 239308

End: 239976

Strand: Direct

Name: yagY

Synonym: SBO_0227

Alternate gene names: 82542826

Gene position: 239308-239976 (Clockwise)

Preceding gene: 82542825

Following gene: 82542828

Centisome position: 5.29

GC content: 55.16

Gene sequence:

>669_bases
ATGAAAAAGCACCTTCTGCCTCTCGCTCTGCTGTTTTCCGGAATATCTCCGGCCCAGGCGCTGGATGTCGGCGATATATC
ATCGTTTATGAACAGTGACAGCAGCACGCTGAGCAAAACGATCAAAAACAGTACCGACAGTGGTCGCCTTATCAATATCC
GTCTCGAACGGCTCTCTTCACCGCTTGACGACGGGCAGGTTATCTCAATGGACAAGCCGGATGAGTTGCTACTCACTCCC
GCCAGCTTGCTGCTACCCGCCCAAGCCAGCGAAGTGATCCGCTTCTTCTATAAGGGACCCGCAGATGAAAAAGAGCGCTA
CTACCGCATTGTCTGGTTTGATCAGGCCCTCAGTGATGCGCAGCGCGATAATGCCAACCGCAGCGCTGTGGCCACTGCTT
CCGCCCGCATCGGCACCATTCTGGTCGTCGCCCCTCGTCAGGCGAACTACCACTTTCAGTACGCCAACGGCTCCCTGACA
AATACAGGAAATGCGACGCTGCGGATCCTCGCCTACGGCCCCTGCCTGAAAGCCGCCAACGGTAAGGAGTGTAAAGAGAA
TTACTACCTGATGCCGGGCAAGTCGCGTCGTTTTACCCGCGTGGACACTGCGGATAACAAAGGACGGGTTGCACTTTGGC
AGGGTGATAAGTTCATTCCCGTGAAATAG

Upstream 100 bases:

>100_bases
CGGCGACGTTAGCGTACAGTTCGACGCGACCTGGACCAGTTAATCTCTCTGATGTACCAGCAGGGGTAGCCCCCCTGCTT
TATTCCTGGACGGAATTGTT

Downstream 100 bases:

>100_bases
ATAGCTGTGCAGATGGATAACGACAATGCCTTTACGACGGTTCTCCCCAGGACTGAAAGCCCAGTTTGCCTTCGGCATGG
TCTTTTTGTTCGTTCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTP
ASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK

Sequences:

>Translated_222_residues
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTP
ASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK
>Mature_222_residues
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTP
ASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the matC family

Homologues:

Organism=Escherichia coli, GI1786485, Length=222, Percent_Identity=100, Blast_Score=458, Evalue=1e-130,
Organism=Escherichia coli, GI87081712, Length=179, Percent_Identity=30.7262569832402, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MATC_ECO24 (A7ZI26)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001461455.1
- ProteinModelPortal:   A7ZI26
- STRING:   A7ZI26
- EnsemblBacteria:   EBESCT00000021977
- GeneID:   5587335
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_0302
- eggNOG:   NOG78051
- GeneTree:   EBGT00050000008773
- HOGENOM:   HBG467847
- OMA:   DGKECKE
- ProtClustDB:   CLSK879618
- BioCyc:   ECOL331111:ECE24377A_0302-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24517; Mature: 24517

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSS
CCCCHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEHHHCC
PLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDA
CCCCCEEEECCCCCCEEECCHHHCCCCCHHHHHHHHHCCCCCCCHHEEEEEEECHHHHHH
QRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAAN
HHCCCCCCEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCEECCCC
GKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK
CCCCCCCEEECCCCCCCEEEEECCCCCCEEEEEECCEEECCC
>Mature Secondary Structure
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSS
CCCCHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEHHHCC
PLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDA
CCCCCEEEECCCCCCEEECCHHHCCCCCHHHHHHHHHCCCCCCCHHEEEEEEECHHHHHH
QRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAAN
HHCCCCCCEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCEECCCC
GKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK
CCCCCCCEEECCCCCCCEEEEECCCCCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA