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The map label for this gene is yaeB [H]

Identifier: 82542794

GI number: 82542794

Start: 204865

End: 205572

Strand: Reverse

Name: yaeB [H]

Synonym: SBO_0184

Alternate gene names: 82542794

Gene position: 205572-204865 (Counterclockwise)

Preceding gene: 82542795

Following gene: 82542793

Centisome position: 4.55

GC content: 54.8

Gene sequence:

>708_bases
ATGAGCAGTTTCCAGTTCGAGCAAATAGGCGTTATTCGCTCGCCCTATAAAGAAAAATTCGCCGTTCCGCGCCAGCCAGG
TCTGGTAAAAAGCGCCAACGGCGAACTGCATCTCATTGCTCCCTACAACCAGGCCGACGCCGTTCGCGGCCTGGAAGCGT
TCAGCCATTTATGGATCCTTTTCGTCTTTCATCAAACGATGGAAGGCGGCTGGCGTCCGACTGTGCGTCCACCGCGCCTC
GGCGGTAACGCCAGAATGGGGGTTTTCGCAACACGCTCTACTTTCCGCCCTAACCCAATTGGTATGTCGCTGGTAGAGCT
GAAAGAGGTTGTTTGCCATAAAGACAGCGTGATTCTGAAGCTCGGCAGTCTGGATCTGGTCGATGGTACGCCGGTAGTGG
ATATCAAACCGTATCTCCCCTTTGCCGAATCGCTTCCCGATGCCAGTGCCAGCTATGCGCAAAGTGCGCCAGCTGCAGAG
ATGGCGGTGAGTTTTACCGCAGAGGTCGAAAAGCAGCTTTTGACGCTGGAGAAGCGTTATCCGCAGTTAACGCTGTTTAT
CCGCGAAGTACTGGCGCAGGACCCGCGCCCGGCCTATCATAAAGGTGAGGAAACGGGCAAAACCTATGCCGTCTGGCTAC
ATGATTTTAACGTTCGCTGGCGCGTCACCGACGCAGGTTTTGAAGTCTTTGCGCTGGAACCGCGTTAA

Upstream 100 bases:

>100_bases
CCAATGCGGTATTACTGCATAGCTGCGAAGTCACCAGCGGTACGCCAGGCTGCTATCGTCAGGCTGTATGTATCGGCTCT
GCGCTTAACATTACGGCGAA

Downstream 100 bases:

>100_bases
ATTCACGCCCTTCTCTTTTGACATTTCTTTTGCACTGGTAAACTAAATCACTTTTTTTGTCCCAGGCTCGCCTTGAGCCT
GTTCTACCTTCCAACTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRL
GGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR

Sequences:

>Translated_235_residues
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRL
GGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
>Mature_234_residues
SSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLG
GNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEM
AVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=135, Percent_Identity=40.7407407407407, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1786393, Length=235, Percent_Identity=99.5744680851064, Blast_Score=482, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24586408, Length=163, Percent_Identity=41.1042944785276, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45552503, Length=142, Percent_Identity=43.6619718309859, Blast_Score=110, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26344; Mature: 26212

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWIL
CCCCCCHHHCCCCCCHHHHCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILK
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE
LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY
ECCEEEECCCCEEEECCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
SSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWIL
CCCCCHHHCCCCCCHHHHCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILK
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE
LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY
ECCEEEECCCCEEEECCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]