| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is fhuB [H]
Identifier: 82542753
GI number: 82542753
Start: 157615
End: 159597
Strand: Direct
Name: fhuB [H]
Synonym: SBO_0142
Alternate gene names: 82542753
Gene position: 157615-159597 (Clockwise)
Preceding gene: 82542752
Following gene: 82542755
Centisome position: 3.49
GC content: 59.46
Gene sequence:
>1983_bases GTGAGTAAACGAATTGCGCTTTTCCCGGCGTTATTGCTGGCGCTGCTGGTGATTGTCGCTACGGCGCTGACCTGGATGAA CTTTTCGCAGGCGCTGCCGCGTAGCCAGTGGGCGCAGGCCGCCTGGTCGCCGGATATTGACGTCATCGAGCAGATGATTT TTCACTACAGCTTGCTGCCGCGTCTGGCGATTTCGCTGCTGGTGGGCGCAGGCCTGGGGCTGGTGGGCGTGCTGTTTCAG CAAGTGCTGCGTAATCCGCTGGCGGAACCGACGACACTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTAC GCTCTGGGCGATCCCAGGGGCGATGGCGAGTCAGTTTGCTGCGCTGGCGGGCGCTTGCGTTGTTGGCTTAATCGTCTTTG GCGTCGCGTGGGGGAAACGGCTTTCGCCGGTAACGCTGATCCTCGCGGGGCTGGTAGTGAGCCTTTATTGTGGGGCAATC AATCAGTTACTGGTTATCTTCCACCATGACCAACTGCAAAGCATGTTCCTGTGGAGCACCGGAACGCTGACGCAAACCGA CTGGGGCGGTGTTGAGCGTTTATGGCCGCAGTTGCTGGGCGGTGTGATGCTGACGTTGCTGCTACTTCGCCCGTTAACCC TGATGGGGCTTGATGATGGCGTGGCGCGCAATCTCGGGCTGGCCTTGTCGCTCGCGCGTCTGGCGGCGCTGTCGCTGGCG ATTGTCATCAGTGCGCTGCTGGTGAACGCGGTGGGGATTATCGGCTTTATCGGGTTGTTTGCGCCGTTGCTGGCAAAAAT GCTGGGGGCGCGGCGTCTGCTGCCGCGACTGATGCTGGCGTCGTTGATTGGTGCGCTGATCCTCTGGCTTTCCGATCAAA TCATCCTCTGGCTGACTCGCGTGTGGATGGAAGTGTCCACCGGTTCGGTCACTGCGTTGATCGGTGCGCCGCTGCTACTG TGGCTGTTGCCGCGTTTACGCAGCATTAGCGCGCCGGATATGAAGGTCAACGATCGTGTCGCGGCTGAACGCCAACATGT GCTGGCGTTTGCCCTCGCGGGCGGCGTGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTGATGCGCACG GCTGGATGTGGGCGAGCGGGGCGTTGCTCGATGATTTAATGCCCTGGCGCTGGCCGCGAATTATGGCGGCGCTATTTGCG GGCGTCATGCTGGCGGTGGCGGGCTGTATTATTCAGCGACTGACCGGCAACCCGATGGCAAGCCCGGAAGTGCTGGGGAT TAGCTCCGGCGCAGCGTTTGGCGTGGTACTGATGCTGTTTCTGGTACCGGGTAATGCTTTTGGCTGGCTGTTACCCGCGG GAAGTATCGGTGCCGCGGTGACGCTGTTGATTATTATGATCGCCGCCGGGCGCGGTGGATTTTCCCCACACCGCATGTTA CTGGCGGGGATGGCGTTAAGTACCGCATTCACCATGCTTTTAATGATGTTGCAGGCGAGTGGTGACCCGCGAATGGCGCA AGTGCTCACCTGGATCTCTGGTTCGACCTACAACGCCACCGATGCGCAGGTCTGGCGTACCGGAATTGTGATGGTGATTT TGCTGGCGATTACCCCGCTGTACCGCCGCTGGCTGACCATTTTACCTCTGGGCGGTGATACCGCACGAGCTGTGGGAATG GCGCTGACGCCGACGCGAATTGCGCTGCTGCTGTTAGCGGCTTGCCTGACGGCGACCTCGACGATGACTATTGGACCGTT GAGTTTTGTTGGTTTAATGGCACCGCATATTGCGCGGATGATGGGTTTTCGACGGACGATGCCACACATCGTAATTTCGG CGCTGGTGGGTGGTTTACTGCTGGTATTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGG CTGCTGTCGACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAA
Upstream 100 bases:
>100_bases CCGGACGCTTTCAGCGCGTACCCGCAGTCTGGTTTTATGGTGCGACGCTCTCGGCAATGCACTTTGTGCGCGTTCTGGAT AACGCCATCGGAGGTAAAGC
Downstream 100 bases:
>100_bases TTGAGTGCCTCGCCCGGTGGGCGAGGCAAAATTATCACAACTTCGCAAATACCCGACGTGCAGCATCGATGGTGTTATTG ATATCTTCCATGCTGTGCGC
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQ QVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLL WLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWPRIMAALFA GVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSIGAAVTLLIIMIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGM ALTPTRIALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAG LLSTFIGAPYFIYLLRKQSR
Sequences:
>Translated_660_residues MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQ QVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLL WLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWPRIMAALFA GVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSIGAAVTLLIIMIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGM ALTPTRIALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAG LLSTFIGAPYFIYLLRKQSR >Mature_659_residues SKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQ VLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAIN QLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLAI VISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLW LLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWPRIMAALFAG VMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSIGAAVTLLIIMIAAGRGGFSPHRMLL AGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMA LTPTRIALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGL LSTFIGAPYFIYLLRKQSR
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=660, Percent_Identity=99.0909090909091, Blast_Score=1255, Evalue=0.0, Organism=Escherichia coli, GI1790740, Length=276, Percent_Identity=36.5942028985507, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790741, Length=281, Percent_Identity=35.2313167259786, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1786804, Length=278, Percent_Identity=31.6546762589928, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1786805, Length=277, Percent_Identity=35.0180505415162, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1788004, Length=274, Percent_Identity=32.1167883211679, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70501; Mature: 70370
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHH RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCHHHHHHHH ALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWST HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLM HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVVVALSFGRDAHGWMWASGALLDDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMA HHHHHHHCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSIGAAVTLLIIMIAAGRGGFSPHRML CCCEEECCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATSTMTIGPLSFVGLMAPHIARM HHHHHHEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHH MGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure SKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHH RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCHHHHHHHH ALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWST HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLM HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVVVALSFGRDAHGWMWASGALLDDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMA HHHHHHHCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSIGAAVTLLIIMIAAGRGGFSPHRML CCCEEECCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATSTMTIGPLSFVGLMAPHIARM HHHHHHEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHH MGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3020380; 8202364; 9278503; 2823072 [H]