| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is fhuA [H]
Identifier: 82542750
GI number: 82542750
Start: 153691
End: 155880
Strand: Direct
Name: fhuA [H]
Synonym: SBO_0139
Alternate gene names: 82542750
Gene position: 153691-155880 (Clockwise)
Preceding gene: 82542749
Following gene: 82542751
Centisome position: 3.4
GC content: 45.66
Gene sequence:
>2190_bases ATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCGCAGTTGTAGTAGCCACAGCGGTTAGCGGCAT GTCTGTTTATGCACAGGCAGCGGTTGAACCGAAAGAAGACACTATCACCGTTACCGCTGCACCTGCGCCGCAAGAAAGCG CATGGGGGCCTGCTGCAACTATTGCGGCGAAGCACTCTGCTACTGCGACTAAAACGGATACACCAATTGAAAAAACGCCG CAGTCTATTTCGGTTGTGACAAATGAAGAGATGCAGATGCATCAATTTCAGTCTGTAAAAGAAGCATTAGGTTATACACC TGGCGTTACGGTTAGCAGTCGTGGTGCTTTTAATACATATGATTTTGTTATCATTCGTGGTTTCTCATCTGTTGGTTTGA ATCAAAATAATTACCTTGATGGACTAAAACTTCAGGGCAACTTTTATAACGATGCTGTGATTGATCCTTACATGCTCGAG AGGGTTGAACTGATGCGTGGGCCGACGTCTGTTCTCTATGGAAAAAGTAATCCTGGTGGGATTATTTCTATGGTGAGTAA GCGTCCGACCACTGAACCCCTGAAAGAAATTCAGTTTAAAATGGGGACGGATAATCTGTTTCAGACCGGATTCGATTTCA GTGATGCACTGGATGATAACGGTGAGTTCTCTTACCGTTTGACGGGCCTCGCTCGCTCAACAAACGAACAGCAGAAAAAC TCTGAATCTCAGCGTTATACCATTGCTCCATCATTCTCATGGCGTCCAGACGACAAAACCAATTTTACTTTCCTGTCCTA TTTCCAGAATGAACCAGAAACGGGTTATTACGGTTGGTTGCCGAAAGAGGGGACCGTTGAGCCATTGCCTAATGGTAAGC GTCTACCGACTGACTTCAATGAAGGTGCATCGAATAATACATACTCCCGTAACCAGAAAATGGTGGGATATAGTTTTGAA CATGGTTTTAATGACACCTTCACCGTGCGTCAGAATCTGCGTTTCAGTGAAATGAAAACCTCACAGAAAAGTGTTTATGG CACAGGGATTGCTGGTGATGGTCATACCCTAAACCGCGGGACAGTGGTGGATAATGAGCGTCTACAAAACTTTAGCGTTG ATACCCAACTTGAAAGTAAGTTTGCTACAGGTGACGTCGAGCATACTTTGCTGACAGGGGTAGACTTCATGCGGATGCGT AATGATATCAATGCCAGCTTTGGATCCGCACCATCCATCGATCTTTATAACAAATATCACCCTGAATACTTTGCATTTGG TAGCGCAGAGCCATACCAGATGAATGAAAGCAAACAAACAGGTATTTATGTTCAGGATCAGGCGGAATGGAATAAATGGG TATTCACTCTGGGGGGACGCTACGATTGGTCTAAGCAAGCGACCACTGTTCGTGAAAACTCTTATACGCCGACTGAAGGT TATATTGAGCGCAATGATCATCAGTTCACCTGGCGCGGTGGTGTAAATTACTTATTCGATAATGGTATTTCACCTTACTT TAGCTATAGCCAGTCCTTTGAACCGAGTGCTTTCGATCTGTGGAGCAACCCACGCATTTCCTATAAGCCATCGAAAGGTG AACAGTATGAAGCTGGCGTAAAATATGTTCCGAATGATATGCCGGTCGTTGTTACGGGCGCAGTCTATCAATTGACGAAA ACAAATAACCTGACAGCAGACCCAACAAACCCATTAGCGCAAGTCCCAGCAGGTGAGATTCGCGCTCGTGGTGTGGAACT TGAAGCAAAAGCGGCGTTAAATGCCAATATTAACTTGACGGCTTCTTATACCTACACCGATGCGGAATACACCAAAGACA CCAATCTCAAAGGTAAAACTCCAGAACAAGTACCGGAGCATATGGCATCTCTCTGGGGGGATTATACCTTCAATGAAGGG CCGCTTTCTGGTTTAACATTGGGAACAGGTGGTCGTTTTATTGGTTCCAGCTATGGTGATCCGGCAAACACTTTTAAAGT GGGTAGCGCAGCTGTAATGGATGCTGTTGTAAAATATGATCTGGCACGCTTTGGTATGGCGGGATCCAGCCTTGCTGTGA ACGTCAACAATTTGCTCGATCGTGAGTATGTTGCCAGTTGCTTCCAGACTTATGGCTGCTTCTGGGGCGCAGAACGTCAG GTCGTTGCAACCGCAACCTTCCGTTTCTAA
Upstream 100 bases:
>100_bases CGTACCGCTTGCGAACCCGCCAGCGTTTCGAATATTATCTTATCTTTATAATAATCATTCTCGTTTACGTTATCATTCAC TTTACATCAGAGATATACCA
Downstream 100 bases:
>100_bases TTTCTCTTTTGGGGCACGGATTTCCGTGCCCATTTCACAAGTTGGCTGTTATGCAGGAATACACGAATCATTCCGATACC ACTTTTGCACTGCGTAATAT
Product: ferrichrome outer membrane transporter
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTP QSISVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAFNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALDDNGEFSYRLTGLARSTNEQQKN SESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFE HGFNDTFTVRQNLRFSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLTGVDFMRMR NDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEWNKWVFTLGGRYDWSKQATTVRENSYTPTEG YIERNDHQFTWRGGVNYLFDNGISPYFSYSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTK TNNLTADPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQVPEHMASLWGDYTFNEG PLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLARFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQ VVATATFRF
Sequences:
>Translated_729_residues MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTP QSISVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAFNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALDDNGEFSYRLTGLARSTNEQQKN SESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFE HGFNDTFTVRQNLRFSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLTGVDFMRMR NDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEWNKWVFTLGGRYDWSKQATTVRENSYTPTEG YIERNDHQFTWRGGVNYLFDNGISPYFSYSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTK TNNLTADPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQVPEHMASLWGDYTFNEG PLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLARFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQ VVATATFRF >Mature_728_residues ARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTPQ SISVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAFNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLER VELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALDDNGEFSYRLTGLARSTNEQQKNS ESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEH GFNDTFTVRQNLRFSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLTGVDFMRMRN DINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEWNKWVFTLGGRYDWSKQATTVRENSYTPTEGY IERNDHQFTWRGGVNYLFDNGISPYFSYSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKT NNLTADPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQVPEHMASLWGDYTFNEGP LSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLARFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQV VATATFRF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=754, Percent_Identity=74.0053050397878, Blast_Score=1113, Evalue=0.0, Organism=Escherichia coli, GI1787024, Length=806, Percent_Identity=24.317617866005, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1787344, Length=789, Percent_Identity=22.8136882129278, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787723, Length=729, Percent_Identity=22.3593964334705, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788478, Length=132, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80835; Mature: 80704
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAAT CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHCCCCCCCCEEEEEECCCCCCCCCCCCEE IAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAFNTY EEECCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCE DFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLERVELMRGPTSVLYGKSNPGG EEEEEECCHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC IISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALDDNGEFSYRLTGLARSTNEQQKN EEEEECCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCEEEEEEEEHHCCCHHHHC SESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC EGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLRFSEMKTSQKSVYGTGIAGDGHTLNRG CCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHCCCHHEEECCCCCCCCCCCCC TVVDNERLQNFSVDTQLESKFATGDVEHTLLTGVDFMRMRNDINASFGSAPSIDLYNKYH EEECCHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC PEYFAFGSAEPYQMNESKQTGIYVQDQAEWNKWVFTLGGRYDWSKQATTVRENSYTPTEG CCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCC YIERNDHQFTWRGGVNYLFDNGISPYFSYSQSFEPSAFDLWSNPRISYKPSKGEQYEAGV CEECCCCEEEEECCCCEEECCCCCHHHCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCC KYVPNDMPVVVTGAVYQLTKTNNLTADPTNPLAQVPAGEIRARGVELEAKAALNANINLT EECCCCCCEEEECEEEEEEECCCCCCCCCCCHHHCCCCHHHCCCEEEEEEEEECCCEEEE ASYTYTDAEYTKDTNLKGKTPEQVPEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGD EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC PANTFKVGSAAVMDAVVKYDLARFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQ CCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE VVATATFRF EEEEEEECC >Mature Secondary Structure ARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAAT CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHCCCCCCCCEEEEEECCCCCCCCCCCCEE IAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAFNTY EEECCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCE DFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLERVELMRGPTSVLYGKSNPGG EEEEEECCHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC IISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALDDNGEFSYRLTGLARSTNEQQKN EEEEECCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCEEEEEEEEHHCCCHHHHC SESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC EGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLRFSEMKTSQKSVYGTGIAGDGHTLNRG CCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHCCCHHEEECCCCCCCCCCCCC TVVDNERLQNFSVDTQLESKFATGDVEHTLLTGVDFMRMRNDINASFGSAPSIDLYNKYH EEECCHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC PEYFAFGSAEPYQMNESKQTGIYVQDQAEWNKWVFTLGGRYDWSKQATTVRENSYTPTEG CCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCC YIERNDHQFTWRGGVNYLFDNGISPYFSYSQSFEPSAFDLWSNPRISYKPSKGEQYEAGV CEECCCCEEEEECCCCEEECCCCCHHHCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCC KYVPNDMPVVVTGAVYQLTKTNNLTADPTNPLAQVPAGEIRARGVELEAKAALNANINLT EECCCCCCEEEECEEEEEEECCCCCCCCCCCHHHCCCCHHHCCCEEEEEEEEECCCEEEE ASYTYTDAEYTKDTNLKGKTPEQVPEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGD EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC PANTFKVGSAAVMDAVVKYDLARFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQ CCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE VVATATFRF EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]