Click here to switch to the map view.

The map label for this gene is yacH [H]

Identifier: 82542720

GI number: 82542720

Start: 117764

End: 119587

Strand: Reverse

Name: yacH [H]

Synonym: SBO_0106

Alternate gene names: 82542720

Gene position: 119587-117764 (Counterclockwise)

Preceding gene: 82542723

Following gene: 82542715

Centisome position: 2.65

GC content: 54.5

Gene sequence:

>1824_bases
GTGCTGGCACTAATTTGCAGTGCCGGGCTTTGTGCCGCCTCTGCCGGGCTATATATAAAAAGCCGCACAGTGGAAGCGGC
TGTGGAAACGCAATCGACACAACTGGCTGTGTCTGACGCTGCCGCGGTTACGCTTCCTGCAACGGTTTCCGCGCCTCCCG
TAACACCCGCCGTCGTTAAATCCGCATTCAGCACTGCACAAATAGATCAATGGGTCGCGCCCGTCGCGCTGTATCCCGAC
GCCCTACTTTCGCAGGTGCTGATGGCATCAACCTATCCGGCAAACGTTGCTCAAGCAGTGCAATGGTCGCACGATAATCC
ACTTAAACAAGGCGATGCTGCTATTCAGGCGGTATCTGACCAGCCGTGGGACGCCAGCGTTAAATCACTGGTGGCCTTTC
CACAATTGATGGCATTGATGGGCGAAAACCCGCAATGGGTGCAAAACCTGGGCGATGCTTTTCTGGCGCAGCCGCAGGAC
GTGATGGACTCGGTACAGCGATTGCGGCAACTGGCGCAACAAACCGGTTCGCTGAAGTCATCAAACGAACAAAAAGTTAT
TACCACAACGAAGAAAGCTGTACCGGTAAAACAGACAGTCACGGCACCCGTCATACCATCCAATACCGTTTTAACTGCCA
GCCCCGTCATTACAGAGCCTGCAACAACCGTCATTTCCATTGAGCCCGCCAATCCTGATGTGGTCTATATTCCCAACTAC
AACCCAACCGTGGTTTACGGGAACTGGGCCAATACTGCGTATCCGCCGGTTTATCTGCCACCACCAGCCGGAGAACCGTT
TATTGACAGCTTTGTGCGCGGATTCGGCTATAGCATGGGTGTTGCTACCACGTACGCACTATTCAGCAGCATCGACTGGG
ATGACGACGATCATGACCATCATCATCATGACGATGATGATTATCATCACCACGATGGCGGTCATCGTGACGGTAATGGC
TGGCAACACAACGGCGACAACATCAATATCGACGTCAACAATTTCAACCGTATCACCGGTGAGCATCTTACTGATAAGAA
TATGGCATGGCGGCACAATCCAAACTACCGTAATGGTGTGCCCTATCATGATCAGGATATGGCAAAGCGGTTTCATCAAA
CCGATGTCAACGGCGGAATGAGTGCCACGCAGCTACCTGCTCCAACACGCGACAGCCAGCGTCAGGCGGCAGCAAGTCAG
TTTCAGCAACGAACACACGCCGCCCCCGTCATTACACGAGATACCCAACGTCAGGCAGCGGCACAGCGGTTTAATGAAGC
TGAACACTATGGGAGCTATGACGACTTCCGCGACTTCAGCCGTCGCCAACCCCTGACCCAGCAACAAAAGGACGCCGCTC
GTCAGCGTTATCAGTCAGCTTCTCCTGAGCAGCGCCAGGCAGTTCGCGAGAGAATGCAGACTAACCCGCAGATCCAGCAG
CGAAGAGAGGCAGCGCGTGAGCGCATTCAGCCCGCCTCGCCTGAGCAGCGCCAGGCAGTCCGCGAGAAAATGCAGACTAA
CCCACAGATCCAGCAGCGAAGAGACGCAGCGCGTGAGCGTATTCAGTCAGCCTCGCCTGAGCAGCGCCAGGTGTTTAAGG
AAAAAGTACAGCAGCGCCCACTGAACCAACAGCAACGTGATAACGCCCGCCAGCGTGTTCAATCAGCATCACCTGAACAA
CGTCAGGTTTTTCGGGAGAGAGTTCAGGAGAGCCGCCCACAACGTCTAAACGACAGTAACCGTACTGCCAGATTGAATAA
CGATCAACGGTCAGCAGTACGCGAACGTCTCTCTGAGCGCGGAGCAAGGCGACTGGAAAGGTAA

Upstream 100 bases:

>100_bases
TTTATACTCGGATTAACAGCACCTGCGGGTGGCAGTTCGCCGACCATTGCGATTTCCTTGAGATCCGAATTATGAAAATG
ACTTTGCCGTTTAACCCCAT

Downstream 100 bases:

>100_bases
ATTACAGACGTAAAAAAAGCGGCGTGGTTAGCCGCTTTTTTAATTGCCGGATGTTCCGGCAAACGAAAAATTACTTCTTC
TTCGCTTTCGGGTTCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MLALICSAGLCAASAGLYIKSRTVEAAVETQSTQLAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPD
ALLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQD
VMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSNTVLTASPVITEPATTVISIEPANPDVVYIPNY
NPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNG
WQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQ
FQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQ
RREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQ
RQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER

Sequences:

>Translated_607_residues
MLALICSAGLCAASAGLYIKSRTVEAAVETQSTQLAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPD
ALLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQD
VMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSNTVLTASPVITEPATTVISIEPANPDVVYIPNY
NPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNG
WQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQ
FQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQ
RREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQ
RQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER
>Mature_607_residues
MLALICSAGLCAASAGLYIKSRTVEAAVETQSTQLAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPD
ALLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQD
VMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSNTVLTASPVITEPATTVISIEPANPDVVYIPNY
NPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNG
WQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQ
FQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQ
RREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQ
RQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=607, Percent_Identity=96.7051070840198, Blast_Score=1146, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 68127; Mature: 68127

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALICSAGLCAASAGLYIKSRTVEAAVETQSTQLAVSDAAAVTLPATVSAPPVTPAVVK
CEEEEECCCHHHHHCCCEEECCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHH
SAFSTAQIDQWVAPVALYPDALLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
QPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQLAQQTGSLKS
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
SNEQKVITTTKKAVPVKQTVTAPVIPSNTVLTASPVITEPATTVISIEPANPDVVYIPNY
CCCCEEEEEHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCC
NPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDH
CCEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
HHHDDDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHH
AQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQ
HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
RREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRP
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSER
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
GARRLER
HHHHCCC
>Mature Secondary Structure
MLALICSAGLCAASAGLYIKSRTVEAAVETQSTQLAVSDAAAVTLPATVSAPPVTPAVVK
CEEEEECCCHHHHHCCCEEECCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHH
SAFSTAQIDQWVAPVALYPDALLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
QPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQLAQQTGSLKS
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
SNEQKVITTTKKAVPVKQTVTAPVIPSNTVLTASPVITEPATTVISIEPANPDVVYIPNY
CCCCEEEEEHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCC
NPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDH
CCEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
HHHDDDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHH
AQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQ
HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
RREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRP
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSER
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
GARRLER
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]