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The map label for this gene is araB [H]

Identifier: 82542667

GI number: 82542667

Start: 55933

End: 57633

Strand: Reverse

Name: araB [H]

Synonym: SBO_0050

Alternate gene names: 82542667

Gene position: 57633-55933 (Counterclockwise)

Preceding gene: 82542670

Following gene: 82542666

Centisome position: 1.28

GC content: 57.97

Gene sequence:

>1701_bases
ATGGCGATTGCAATTGGCCTCGATTTTGGCAGTGATTCTGTGCGAGCTTTGGCGGTGGACTGCGCCAGCGGTGAAGAGAT
CGCCACCAGCGTAGAGTGGTATCCCCGTTGGCAAAAAGGGCAATTTTGTGATGCCCCGAATAACCAGTTCCGTCATCATC
CGCGTGACTACATTGAGTCAATGGAAGCGGCACTGAAAACCGTGCTTGCAGAGCTTAGCGTCGAACAGCGCGCAGCTGTG
GTCGGGATTGGCGTTGACAGTACCGGCTCGACGCCCGCACCGATTGATGCCGACGGTAACGTGCTGGCGCTGCGCCCGGA
GTTTGCCGAAAACCCAAACGCGATGTTCGTATTGTGGAAAGACCACACTGCGGTTGAAGAAGCGGAAGAGATTACCCGTT
TGTGCCACGCGCCGGGCAACGTTGACTACTCCCGCTACATTGGTGGTATTTATTCCAGCGAATGGTTCTGGGCAAAAATC
CTGCATGTGACTCGCCAGGACAGCGCCGTGGCGCAATCTGCCGCATCGTGGATTGAGCTGTGCGACTGGGTGCCAGCTCT
GCTTTCCGGTACCACCCGCCCGCAGGATATTCGTCGCGGACGTTGCAGCGCCGGGCATAAATCTCTGTGGCACGAAAGCT
GGGGCGGCTTGCCGCCAGCCAGTTTCTTTGATGAGCTGGACCCGATCCTCAATCGCCATTTGCCTTCCCCGCTGTTCACT
GACACCTGGACTGCCGATATTCCGGTGGGCACCTTATGCCCGGAATGGGCGCAGCGTCTCGGCCTGCCTGAAAGCGTGGT
GATTTCCGGCGGCGCGTTTGACTGCCATATGGGCGCAGTTGGCGCAGGCGCACAGCCTAACGCACTGGTAAAAGTTATCG
GTACTTCCACCTGCGACATTCTGATTGCCGACAAACAGAGCGTTGGCGAGCGGGCAGTTAAAGGTATTTGCGGTCAGGTT
GATGGCAGCGTGGTACCTGGATTTATCGGTCTGGAAGCAGGCCAATCGGCGTTTGGTGATATCTACGCCTGGTTTGGTCG
CGTACTCGGCTGGCCGCTGGAACAGCTTGCCGCCCAGCATCCGGAACTGAAAGCGCAAATCAACGCCAGCCAGAAACAAC
TGCTTCCGGCGCTGACCGAAGCATGGGCCAAAAATCCGTCTCTGGATCACCTGCCGGTGGTGCTCAACTGGTTTAACGGC
CGCCGCACACCGAACGCTAACCAACGCCTGAAAGGGGTGATTACCGATCTTAACCTCGCTACCGACGCTCCGCTGCTGTT
TGGCGGTTTGATTGCTGCCACCGCCTTTGGCGCACGCGCAATCATGGAGTGCTTTACCGATCAGGGGATCGCCGTCAATA
ACGTGATGGCGCTGGGCGGCATCGCGCGGAAAAACCAGGTCATTATGCAGGCCTGCTGCGACGTGCTGAATCGCCCGCTG
CAAATTGTTGCCTCTGACCAGTGCTGTGCGCTCGGTGCGGCGATTTTTGCTGCCGTCGCCGCGAAAGTGCACGCAGACAT
CCCATCAGCCCAGCAAAAAATGGCCAGTGCGGTAGAGAAAACCCTGCAACCGCGCAGCGAACAGACACAACGCTTTGAAC
AGCTTTATCGCCGCTATCAGCAATGGGCGATGAGCGCCGAACAACACTATCTTCCAACTTCCGCCCCGGCACAGGCTGCC
CAGGCCGTTCCGACTCTATAA

Upstream 100 bases:

>100_bases
ATAGCATTTTTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTT
TTTTTGGATGGAGTGAAACG

Downstream 100 bases:

>100_bases
GGACACGATAATGACGATTTTTGATAATTATGAAGTGTGGTTTGTCATTGGCAGCCAGCATCTGTATGGCCCGGAAACCC
TGCGTCAGGTCACCCAACAT

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAV
VGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQV
DGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLNWFNG
RRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAA
QAVPTL

Sequences:

>Translated_566_residues
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAV
VGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQV
DGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLNWFNG
RRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAA
QAVPTL
>Mature_565_residues
AIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVV
GIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKIL
HVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTD
TWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVD
GSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLNWFNGR
RTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQ
IVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQ
AVPTL

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=582, Percent_Identity=25.7731958762887, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI164663830, Length=606, Percent_Identity=24.7524752475248, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI1786249, Length=566, Percent_Identity=98.9399293286219, Blast_Score=1150, Evalue=0.0,
Organism=Drosophila melanogaster, GI24657106, Length=577, Percent_Identity=25.3032928942808, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24657102, Length=577, Percent_Identity=25.3032928942808, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21356323, Length=460, Percent_Identity=25.4347826086956, Blast_Score=80, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 61154; Mature: 61023

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES
CEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
MEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEECCHHCCCCCEEEEEEC
DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
HHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI
CCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCEEE
LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQH
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC
PELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLNWFNGRRTPNANQRLKGVITDLNLA
CCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHCCCC
TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQ
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QWAMSAEQHYLPTSAPAQAAQAVPTL
HHHHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
AIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES
EEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
MEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEECCHHCCCCCEEEEEEC
DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
HHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI
CCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCEEE
LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQH
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC
PELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLNWFNGRRTPNANQRLKGVITDLNLA
CCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHCCCC
TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQ
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QWAMSAEQHYLPTSAPAQAAQAVPTL
HHHHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA