| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yaaX [H]
Identifier: 82542622
GI number: 82542622
Start: 5232
End: 5528
Strand: Direct
Name: yaaX [H]
Synonym: SBO_0004
Alternate gene names: 82542622
Gene position: 5232-5528 (Clockwise)
Preceding gene: 82542621
Following gene: 82542625
Centisome position: 0.12
GC content: 53.87
Gene sequence:
>297_bases GTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTAC GTTAGTCCCGTCAGTAAAATTACAGATAGGCAATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACC ACGGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCAT AAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAA
Upstream 100 bases:
>100_bases GTAACTTAGAGATTAGGATTGCGGAGAATAACAACCGTCGTTCTCATCGCGTAATCTCCGGATATCGACCCATAACGGGC AATGATAAAAGGAGTAACCT
Downstream 100 bases:
>100_bases ATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTG CAATATATTGAATCTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHH KKAPHDHHGGHGPGKHHR
Sequences:
>Translated_98_residues MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHH KKAPHDHHGGHGPGKHHR >Mature_98_residues MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHH KKAPHDHHGGHGPGKHHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypeC [H]
Homologues:
Organism=Escherichia coli, GI1786186, Length=84, Percent_Identity=97.6190476190476, Blast_Score=157, Evalue=2e-40, Organism=Escherichia coli, GI1788734, Length=68, Percent_Identity=58.8235294117647, Blast_Score=90, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019638 [H]
Pfam domain/function: PF10697 DUF2502 [H]
EC number: NA
Molecular weight: Translated: 11338; Mature: 11338
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGYYWDGGHWRDHGWWKQH CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEECCCEECCCCCCCHH YEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGYYWDGGHWRDHGWWKQH CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCEEECCCEECCCCCCCHH YEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503 [H]