| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is tauA [H]
Identifier: 161984983
GI number: 161984983
Start: 273524
End: 274486
Strand: Direct
Name: tauA [H]
Synonym: SBO_0259
Alternate gene names: 161984983
Gene position: 273524-274486 (Clockwise)
Preceding gene: 82542854
Following gene: 82542856
Centisome position: 6.05
GC content: 56.07
Gene sequence:
>963_bases ATGGCAATTTCATCGCGTAACACACTTCTTGCCGCACTGGCATTCATCGCTTTTCAGGCACAGGCGGTGAACGTCACCGT GGCGTATCAAACCTCAGCCGAACCGGCGAAAGTGGCTCAGGCCGGCAACACCTTTGCTAAAGAGAGCGGGGCGAGCGTGG ACTGGCGTAAGTTTGACAGCGGAGCCAGCATCGTGCGGGCGCTGGCTTCTGGCGACGTGCAAATCGGCAACCTCGGTTCC AGCCCATTAGCGGTTGCAGCCAGCCAACAGGTGCCGATTGAAGTCTTCTTGCTGGCGTCAAAACTGGGTAACTCCGAAGC GCTGGTGGTAAAGAAAACTATCAGCAAACCCGAAGATTTGATTGGCAAACGCATTGCCGTACCGTTTATCTCCACCACCC ACTACAGCCTGCTGGCGGCGCTGAAACACTGGGGGATTAAACTAGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCG ATTATCGCCGCATGGCAGCGGGGTGATATTGATGGTGCTTATGTCTGGGCACCGGCGGTTAACGCCCTGGAAAAAGACGG CAAGGTGTTGACCGATTCTGAACAGGTCGGGCAGTGGGGTGCGCCAACGCTGGACGTCTGGGTGGTGCGCAAAGATTTTG CCGAGAAACATCCTGAGGTCGTGAAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGCAACCGTACATTGCTAACCCAGAC GCGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCGGAAGGTGACGTTCCGGGGCTGGT TAAGGGGAATACCTATCTGACGCCGCAGCAACAAACGGCAGAACTGACCGGACCGGTGAACAAAGTAATCATCGACACCG CGCAGTTTTTGAAAGAGCAGGGCAAGGTCCCGGCTGTAGCGAATGATTACAGCCAGTACGTTACCTCGCGCTTCGTGCAA TAA
Upstream 100 bases:
>100_bases AAGTTGGAGTCATTACCCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACA AGACTGGGGAGCAGACAATC
Downstream 100 bases:
>100_bases AAGGAGGCGCAGATGCTGCAAATCTCTCATCTCTATGCCGATTATGGCGGCAAACCGGCACTGGAAGATATCAACCTGAC GCTGGAAAGCGGCGAGCTAC
Product: taurine transporter substrate binding subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGS SPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ
Sequences:
>Translated_320_residues MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGS SPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ >Mature_319_residues AISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNTFAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSS PLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPAI IAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDA WLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=320, Percent_Identity=98.4375, Blast_Score=631, Evalue=0.0, Organism=Escherichia coli, GI87081803, Length=292, Percent_Identity=23.6301369863014, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 34210; Mature: 34079
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNTFAKESGASVDWRKFDS CCCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCHHHHHHCCCHHHHCCCCCCCHHHCCC GASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDL HHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEEEHHCCCCCEEEEEHHHCCCHHH IGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV HCCEEEEEEECHHHHHHHHHHHHCCEEECCEEEEECCCCEEEEEECCCCCCCEEEECHHH NALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD HHHHHCCCEEECHHHHCCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCH AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQ HHHCCCHHHHHHHHHCCCCCCCCCCEEECCEEECCCHHHHHHCCCHHHHHHHHHHHHHHC GKVPAVANDYSQYVTSRFVQ CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNTFAKESGASVDWRKFDS CCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCHHHHHHCCCHHHHCCCCCCCHHHCCC GASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDL HHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEEEHHCCCCCEEEEEHHHCCCHHH IGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV HCCEEEEEEECHHHHHHHHHHHHCCEEECCEEEEECCCCEEEEEECCCCCCCEEEECHHH NALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD HHHHHCCCEEECHHHHCCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCH AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKVIIDTAQFLKEQ HHHCCCHHHHHHHHHCCCCCCCCCCEEECCEEECCCHHHHHHCCCHHHHHHHHHHHHHHC GKVPAVANDYSQYVTSRFVQ CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]