Click here to switch to the map view.

The map label for this gene is ydjM [H]

Identifier: 161984948

GI number: 161984948

Start: 1341150

End: 1341740

Strand: Reverse

Name: ydjM [H]

Synonym: SBO_1362

Alternate gene names: 161984948

Gene position: 1341740-1341150 (Counterclockwise)

Preceding gene: 82543868

Following gene: 82543866

Centisome position: 29.69

GC content: 50.76

Gene sequence:

>591_bases
ATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGC
ACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTC
TTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCG
GTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGT
GCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTT
TCCGCTTGCCTATCCTAGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGTATGGCATTATTTGTCTGGTCGGTA
TGGATGCCCCATTCATTACCCGAGAACAGCGCTGTTCGTTGGTCATCGCAAATAATCAATACCTTGCAGATCCAGTTTCA
TCGGCTTATTAAGCATCAGGTTGAATACTAA

Upstream 100 bases:

>100_bases
ATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCG
ACAGTTTAGTGAGTTTTATC

Downstream 100 bases:

>100_bases
AAAGACAAAAATCACCTTTCTGGAATAAGCAATTCCATTTGAATATAAGAGCCAGCTCACAGTTCTGTTAATCTTGCGCC
AACACTATGACTGCTACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLA
VFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
WMPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY

Sequences:

>Translated_196_residues
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLA
VFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
WMPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY
>Mature_195_residues
TAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAV
FALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVW
MPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yvsG [H]

Homologues:

Organism=Escherichia coli, GI226510947, Length=196, Percent_Identity=99.4897959183673, Blast_Score=399, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404
- InterPro:   IPR016956 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 22333; Mature: 22202

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW
CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHC
PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQIIN
CCCCCEEECCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLQIQFHRLIKHQVEY
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW
CCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHC
PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQIIN
CCCCCEEECCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLQIQFHRLIKHQVEY
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]