| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is asr [H]
Identifier: 161984941
GI number: 161984941
Start: 1520518
End: 1520805
Strand: Reverse
Name: asr [H]
Synonym: SBO_1539
Alternate gene names: 161984941
Gene position: 1520805-1520518 (Counterclockwise)
Preceding gene: 161984939
Following gene: 82544035
Centisome position: 33.65
GC content: 50.69
Gene sequence:
>288_bases ATGAAAAAAGTATTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTGCGACGAC CACCAAAGCAGCGCCGGCGAAAACGACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGGCAGCTA AAAAGCATCATAAAAATACGAAAGCTGAACAGAAAGCCCCTGAACAAAAAGCGCAGGCAGCGAAGAAACACGCCGGGAAA CACAGTCATCAGCAACCGGCAAAACCTGCTGCACAACCCGCAGCGTAA
Upstream 100 bases:
>100_bases TGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAA AACAAATTGAGGGTATGACA
Downstream 100 bases:
>100_bases GTTTTCAACAGTAATGCTGGCGCGCCCCCTCGCGCCTGAAAATTACGGTGCTAAGCGGGTAACGTTTAGCACCGCCTTTA GCGGAGGGTAGTATGGTGGG
Product: acid shock protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGK HSHQQPAKPAAQPAA
Sequences:
>Translated_95_residues MKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGK HSHQQPAKPAAQPAA >Mature_95_residues MKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGK HSHQQPAKPAAQPAA
Specific function: Required for growth and/or survival at acidic conditions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asr family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009435 [H]
Pfam domain/function: PF06392 Asr [H]
EC number: NA
Molecular weight: Translated: 9850; Mature: 9850
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNT CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC KAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQPAA CHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNT CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC KAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQPAA CHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA