| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yceF [H]
Identifier: 161984919
GI number: 161984919
Start: 1948738
End: 1949322
Strand: Direct
Name: yceF [H]
Synonym: SBO_1976
Alternate gene names: 161984919
Gene position: 1948738-1949322 (Clockwise)
Preceding gene: 82544432
Following gene: 82544449
Centisome position: 43.12
GC content: 50.09
Gene sequence:
>585_bases ATGCCTAAACTTATTTTAGCCTCCACCTCGCCATGGCGTCGCGCTCTTCTGGAAAAACTGCAAATCTCTTTTGAATGTGC AGCACCAGAGGTCGACGAAACCCCACGCAGCGACGAATCACCGCGACAGTTGGTGCTTCGACTGGCACAAGAAAAAGCGC AATCTCTGGCGTCACGTTATCCGGATCATTTAATTATTGGTTCAGACCAGGTATGTGTTCTTGATGGCGAAATCACCGGT AAACCGTTAACGGAAGAAAATGCCCGTCTGCAATTACGCAAAGCCAGCGGCAATATCGTCACCTTCTATACTGGACTGGC GTTGTTTAATTCGGCGAATGGGCATCTACAAACAGAAGTGGAGCCTTTTGACGTCCATTTCCGTCACCTGTGCGAGGCGG AGATTGATAATTACGTGCGTAAGGAGCATCCCCTGCACTGCGCGGGTAGCTTTAAGAGTGAAGGATTTGGCATTACGCTG TTTGAGCGTTTAGAGGGACGTGACCCTAACACGCTGGTTGGTTTACCGCTAATCGCGCTGTGTCAGATGTTACGTCGGGA AGGGAAAAACCCGCTGATGGGATAG
Upstream 100 bases:
>100_bases TTTATTTTCGTTCAGTGCTGATAACGAACATCAACCTGCAAAACGAAGCGCATAGTTTAAAATGGCTATCATCAATACGC TATATCTGATGGAAAAAAAT
Downstream 100 bases:
>100_bases TTGTTTGCGCCGGATGCGGTTACGTCGCATCCGGCAATCGGTGCAGGCGGCCTGATGCGGCGTAAACGCCTTATCAGGCC AACCGCCCATTATCAGGCTT
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITG KPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
Sequences:
>Translated_194_residues MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITG KPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG >Mature_193_residues PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGK PLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLF ERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=7e-14, Organism=Escherichia coli, GI87081830, Length=194, Percent_Identity=99.4845360824742, Blast_Score=397, Evalue=1e-112, Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=35.6756756756757, Blast_Score=105, Evalue=3e-24, Organism=Caenorhabditis elegans, GI193202443, Length=189, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI78706856, Length=192, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21707; Mature: 21576
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRY CCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC PDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEV CCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEECC EPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIAL CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEHHHCCCCCCEEECCCHHHH CQMLRREGKNPLMG HHHHHHCCCCCCCC >Mature Secondary Structure PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRY CCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC PDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEV CCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEECC EPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIAL CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEHHHCCCCCCEEECCCHHHH CQMLRREGKNPLMG HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA