| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is mdoB [H]
Identifier: 161984784
GI number: 161984784
Start: 4474629
End: 4476920
Strand: Reverse
Name: mdoB [H]
Synonym: SBO_4419
Alternate gene names: 161984784
Gene position: 4476920-4474629 (Counterclockwise)
Preceding gene: 82546713
Following gene: 82546710
Centisome position: 99.05
GC content: 51.96
Gene sequence:
>2292_bases TTGTCAGAACTACTCTCTTTCGCCCTTTTTCTCGCCTCTGTGCTGATTTACGCATGGAAAGCGGGACGTAACACCTGGTG GTTTGCAGCCACATTAACGGTGCTGGGGCTATTTGTCGTTTTAAATATCACCCTGTTTGCCAGCGACTATTTTACTGGCG ATGGTATTAACGACGCGGTTCTCTATACCTTAACCAACAGCCTGACCGGTGCTGGCGTCAGCAAATACATCCTGCCGGGT ATCGGCATTGTGCTGGGGCTGACAGCGGTGTTCGGTGCGCTGGGCTGGATCCTGCGCCATCGTCGCCATCATCCGCACCA TTTTGGTTACAGCCTGCTGGCGCTCTTACTGGCGCTGGGTTCGGTGGACGCCAGCCCGGCATTTCGTCAGATAACGGAAC TGGTGAAATCCCAGTCACGCGATGGCGACCCGGACTTTGCGGCTTATTATAAAGAGCCGTCGAAAACTATCCCTGACCCG AAACTCAACCTGGTTTATATCTACGGCGAAAGTCTCGAGCGGACCTATTTTGATAACGAAGCTTTCCCGGATCTCACGCC TGAACTGGGCGCGTTGAAAAATGAAGGCCTGGATTTCAGCCACACGCAGCAGCTGCCAGGAACGGATTACACGATTGCGG GCATGGTGGCTTCTCAGTGCGGCATACCGCTGTTTGCCCCCTTTGAAGGCAACGCCTCCGCCTCTGTCTCCAGCTTCTTC CCGCAGAACATCTGTCTGGGCGATATCCTGAAAAACTCGGGTTATCAGAACTATTTCGTGCAGGGCGCGAATCTGCGTTT TGCCGGTAAAGATGTGTTCCTGAAGTCGCATGGCTTCGACCACTTATACGGCTCAGAAGAGCTGAAAAGCGTGGTGGCCG ACCCGCACTATCGCAACGACTGGGGATTCTACGACGATACCGTTCTCGATGAAGCGTGGAAAAAGTTTGAAGAGCTTTCC CGCTCAGGTCAGCGATTCTCACTGTTTACCCTGACAGTCGATACCCATCACCCGGATGGTTTTATCTCGCGTACCTGTAA CCGCAAAAAATATGATTTTGACGGTAAGCCGAACCAGTCATTCAGCGCGGTAAGTTGCAGCCAGGAGAATATCGCGGCGT TTATCAACAAAATCAAAGCGTCACCGTGGTTTAAAGATACCGTCATCGTCGTCTCTTCTGACCATTTAGCGATGAACAAC ACGGCGTGGAAATACCTCAATAAGCAGGATCGCAATAACCTGTTTTTTGTCATTCGTGGCGACAAGCCGCAGCAAGAGAC GCTGGCAGTGAAGCGTAACACGATGGATAACGGCGCGACGGTGCTGGACATTCTCGGTGGCGATAACTATCTCGGACTTG GTCGTAGCAGTTTATCCGGGCAGTCGATGTCGGAAATCTTCCTCAATATCAAAGAGAAAACATTGGCGTGGAAGCCGGAT ATCATCCGCCTGTGGAAATTCCCTAAAGAGATGAAAGAGTTCACCATCGACCAGCAGAAAAACATGATTGCCTTCTCGGG TAGCCATTTCCGTTTGCCGCTGCTGTTGCGGGTTTCAGACAAACGCGTGGAACCGCTGCCGGAAAGCGAATACTCAGCAC CGCTGCGTTTCCAGCTGGCCGATTTCGCTCCACGCGACAATTTCGTCTGGGTTGACCGTTGCTATAAGATGGCACAACTC TGGGCTCCGGAACTGGCACTCTCCACCGACTGGTGTGTCTCGCAAGGGCAGCTTGGCGGTCAGCAAATTGTTCAACATGT TGACAAAACAACATGGCAGGGCAAAACGGCATTTAAAGATACGGTCATCGACATGGCGCGTTATAAAGGCAATGTCGATA CGCTGAAAATTGTTGATAACGATATTCGCTACAAAGCCGACAGTTTCATCTTCAACGTCGCCGGTGCGCCAGAAGAGGTG AAACAGTTTAGTGGGATTTCCCGTCCAGAGTCGTGGGGCCGCTGGTCCAACGCGCAGCTGGGCGATGAAGTAAAAATCGA GTACAAGCATCCGCTGCCAAAGAAATTTGACCTGGTGATTACCGCCAAAGCATACGGCAATAACGCCAGCCGTCCTATTC CGGTACGCGTAGGCAATGAAGAACAAACCCTTGTGCTGGGCAATGAAGTGACCACCACCACACTGCATTTCGATAACCCA ACCGATGCCGACACACTGGTAATTGTGCCGCCGGAACCTGTCTCAACCAACGAAGGGAATATCCTCGGACACTCGCCACG TAAGCTCGGGATCGGCATGGTGGAAATTAAAGTGGTGGAACGTGAAGGATAA
Upstream 100 bases:
>100_bases TTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTTCTTCTCAAAAAGCTTAAACGTTGGCTAAACGGCCC GGTTTAGTGAGGATCGCCCG
Downstream 100 bases:
>100_bases TTCCTGACTGATGTGTAGGTCGCATAAGGTGCGACCTACACACCTTCTGCGGCCTACAAAACATCATTGAGAAACAGAAA AAAACAGCGCCCAACACTTC
Product: phosphoglycerol transferase I
Products: NA
Alternate protein names: Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase [H]
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPG IGIVLGLTAVFGALGWILRHRRHHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELS RSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNN TAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQL WAPELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEV KQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG
Sequences:
>Translated_763_residues MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPG IGIVLGLTAVFGALGWILRHRRHHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELS RSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNN TAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQL WAPELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEV KQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG >Mature_762_residues SELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGI GIVLGLTAVFGALGWILRHRRHHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPK LNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFFP QNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSR SGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNNT AWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPDI IRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLW APELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVK QFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPT DADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG
Specific function: Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgB family [H]
Homologues:
Organism=Escherichia coli, GI87082433, Length=763, Percent_Identity=99.737876802097, Blast_Score=1576, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR020881 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =2.7.8.20 [H]
Molecular weight: Translated: 85446; Mature: 85315
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAV CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEE LYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRRHHPHHFGYSLLALLLALG EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC SVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNE CCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCHHCCCCC AFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF CCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEECCCCCCCCCHHHHC PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRND CCCCHHHHHHHCCCCCEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCC WGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQS CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC FSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRG CCEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHCCCCCCCCEEEEEEC DKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD CCCCHHHHHEECCCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCC IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLA HHHHHCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEE DFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKD CCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH TVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQL HHHHHHHHCCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCC GDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP CCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCEEEEEEEECCC TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG CCCCEEEEECCCCCCCCCCCEECCCCHHHCCEEEEEEEEECCC >Mature Secondary Structure SELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAV HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEE LYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRRHHPHHFGYSLLALLLALG EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC SVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNE CCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCHHCCCCC AFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF CCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEECCCCCCCCCHHHHC PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRND CCCCHHHHHHHCCCCCEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCC WGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQS CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC FSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRG CCEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHCCCCCCCCEEEEEEC DKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD CCCCHHHHHEECCCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCC IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLA HHHHHCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEE DFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKD CCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH TVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQL HHHHHHHHCCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCC GDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP CCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCEEEEEEEECCC TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG CCCCEEEEECCCCCCCCCCCEECCCCHHHCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA