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The map label for this gene is recN [H]

Identifier: 78780191

GI number: 78780191

Start: 1703781

End: 1705460

Strand: Reverse

Name: recN [H]

Synonym: PMT9312_1805

Alternate gene names: 78780191

Gene position: 1705460-1703781 (Counterclockwise)

Preceding gene: NA

Following gene: 78780190

Centisome position: 99.78

GC content: 27.08

Gene sequence:

>1680_bases
ATGCTAATACAATTAAAAATAAAAAATATAGCCTTAATAGAAATTATAGAAATTAATTTTGAAAAAGGTTTGAACATCAT
TACTGGGGATTCTGGTTCAGGAAAATCACTTGTTTTAGATTCCTTAAATGTTTTATTTGGTGGAACCAATATACCTTTAA
AGCACTTAATACGTCCAGGAAAAGATCATTGTGCTATCGAGGCAAAATTTTCTTCTTCTTTTCACATTAATAACTGGTTA
ATTAGTAATGGTTTTCAAAGCAGTTCTTCAGTACTAAATATCAAAAGAATATCTTATAGAAAAAATAATAAAGTTTTATC
CAAATATAGCCTTAACAATTTATCAATTAACAAAAAATCGTTAGAAGAACTTGGAGGATTATTAATAGATTTTGCAGGTC
AATCAGATACTTTTATATTTCATACTCAAGATAAGAGAAGATTAATTATTGATGATTTATGTTCGCATGAATTTAGAGAT
ACTAGTGCAAAGATTAAAAAAATATGGGGGGAAAGTCAGTTTTTAAAAGGATTAATGAATGAAAAAATAGAATCTTCTAG
GAAGCAAGATGAAAACAATTTAGTAATTAAACAAATGTTGAAGAGTTTAGAGGAAGCTAACTTAAATTCCAGTGAGGAAA
TCTTAGAATTAGAGTCACTAGAAAATAAACTTGTAAATAATCTCGAAATAAATCATTCAATTCAATCATGTTTAGATAAC
TTAAATAATTTTAGCCATGATGAACCATCAGTCGCTTTTTTGATAAATCAATCAATCAAAAATTTAAACAGAACATCAGA
TTTTGATTTAAAAATTCAAAAGTTTAGAGATAAGTTATTAGATATCCAAACTTATGTTGAAGATCTCATTTTTGCTCTAA
ATTCATATATACAAGACATAGATAATCATGAATCTAATCTTTCAGAAATACAACAAAGATTATTTTTTTTAAAAAACTTG
GAAAGAACTTTTTCATTAGCCCTACCTCAATTAATTGAAAAGCGAGATCAATTAAGGACACACTTTCTAAAAAACGATAA
AGATAATGAGATTCGTAATATTGAAAATCAAATTGAAAATTTACAAAGTAAATTAAATTCTTTATTTCTTAATCAATCTT
CTGAAAGAAAAAAAGTTGCCAAACAGTTACAAGATTCAGTAATCTCCATTTTAAGAAATCTAGGATTAGAAAATGCAAAT
TTTTCTATTCAATTTTCCGAATGTAAGCCCTCTGGGGATGGAATTGATAATATAAATTTTTTGTTTTCGGCTAATCCTGA
TCAGAAGCTTGCTCCATTATCAAATGTTATTTCTGGTGGAGAAATGTCAAGATTCTTATTAGCTATTAAATCTAGTATTT
CTAAAAAACCAAATACTTTCTTTTTAGATGAAATTGATAACGGTTTAAGTGGTAAATCCTTATTTTCTTTGGTTGAGCTA
ATAAAAGAAATTTCTAAAGGCCAACAGGTTTTATGTATTACACATCAGCCTTTCTTAGCTGCTCGAGGATTAGCTCATTT
TAAAGTTAATAAAAACGTAATGGATGGAATAACTTATACTTCAATATCAAAACTAACTACAAAAAAACAACGACAACATG
AATTAATAGAACTTATTGGTGGTGCTTCTGCTGAAGTAAATGATTATGCTTCTAGACTTTTAGACCAAGCAGCTGCATAA

Upstream 100 bases:

>100_bases
ACTTCAATAAAATCAGTAAAATCTTCTTTCATAACTTTATATATTTAATACCTTTATTTTTTTAAAAAAGAAGTTAATTT
TTTTATATGGAAGATTTATC

Downstream 100 bases:

>100_bases
AATAGAAAAAATTCTACTATAATAGTTTTTTTAATCATAAATTAGATTTAAGTAAGTATGGTTAATAAAATTGATAATAG
TTTTGAAGAAGACAACTCAA

Product: DNA repair protein RecN, ABC transporter

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLIQLKIKNIALIEIIEINFEKGLNIITGDSGSGKSLVLDSLNVLFGGTNIPLKHLIRPGKDHCAIEAKFSSSFHINNWL
ISNGFQSSSSVLNIKRISYRKNNKVLSKYSLNNLSINKKSLEELGGLLIDFAGQSDTFIFHTQDKRRLIIDDLCSHEFRD
TSAKIKKIWGESQFLKGLMNEKIESSRKQDENNLVIKQMLKSLEEANLNSSEEILELESLENKLVNNLEINHSIQSCLDN
LNNFSHDEPSVAFLINQSIKNLNRTSDFDLKIQKFRDKLLDIQTYVEDLIFALNSYIQDIDNHESNLSEIQQRLFFLKNL
ERTFSLALPQLIEKRDQLRTHFLKNDKDNEIRNIENQIENLQSKLNSLFLNQSSERKKVAKQLQDSVISILRNLGLENAN
FSIQFSECKPSGDGIDNINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKKPNTFFLDEIDNGLSGKSLFSLVEL
IKEISKGQQVLCITHQPFLAARGLAHFKVNKNVMDGITYTSISKLTTKKQRQHELIELIGGASAEVNDYASRLLDQAAA

Sequences:

>Translated_559_residues
MLIQLKIKNIALIEIIEINFEKGLNIITGDSGSGKSLVLDSLNVLFGGTNIPLKHLIRPGKDHCAIEAKFSSSFHINNWL
ISNGFQSSSSVLNIKRISYRKNNKVLSKYSLNNLSINKKSLEELGGLLIDFAGQSDTFIFHTQDKRRLIIDDLCSHEFRD
TSAKIKKIWGESQFLKGLMNEKIESSRKQDENNLVIKQMLKSLEEANLNSSEEILELESLENKLVNNLEINHSIQSCLDN
LNNFSHDEPSVAFLINQSIKNLNRTSDFDLKIQKFRDKLLDIQTYVEDLIFALNSYIQDIDNHESNLSEIQQRLFFLKNL
ERTFSLALPQLIEKRDQLRTHFLKNDKDNEIRNIENQIENLQSKLNSLFLNQSSERKKVAKQLQDSVISILRNLGLENAN
FSIQFSECKPSGDGIDNINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKKPNTFFLDEIDNGLSGKSLFSLVEL
IKEISKGQQVLCITHQPFLAARGLAHFKVNKNVMDGITYTSISKLTTKKQRQHELIELIGGASAEVNDYASRLLDQAAA
>Mature_559_residues
MLIQLKIKNIALIEIIEINFEKGLNIITGDSGSGKSLVLDSLNVLFGGTNIPLKHLIRPGKDHCAIEAKFSSSFHINNWL
ISNGFQSSSSVLNIKRISYRKNNKVLSKYSLNNLSINKKSLEELGGLLIDFAGQSDTFIFHTQDKRRLIIDDLCSHEFRD
TSAKIKKIWGESQFLKGLMNEKIESSRKQDENNLVIKQMLKSLEEANLNSSEEILELESLENKLVNNLEINHSIQSCLDN
LNNFSHDEPSVAFLINQSIKNLNRTSDFDLKIQKFRDKLLDIQTYVEDLIFALNSYIQDIDNHESNLSEIQQRLFFLKNL
ERTFSLALPQLIEKRDQLRTHFLKNDKDNEIRNIENQIENLQSKLNSLFLNQSSERKKVAKQLQDSVISILRNLGLENAN
FSIQFSECKPSGDGIDNINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKKPNTFFLDEIDNGLSGKSLFSLVEL
IKEISKGQQVLCITHQPFLAARGLAHFKVNKNVMDGITYTSISKLTTKKQRQHELIELIGGASAEVNDYASRLLDQAAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=565, Percent_Identity=25.4867256637168, Blast_Score=165, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63289; Mature: 63289

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLKIKNIALIEIIEINFEKGLNIITGDSGSGKSLVLDSLNVLFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCEEHHCCHHHHCCCCCCCHHHHCCCC
KDHCAIEAKFSSSFHINNWLISNGFQSSSSVLNIKRISYRKNNKVLSKYSLNNLSINKKS
CCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEHHHHCCCCCCEEHEECCCCCCCCHHH
LEELGGLLIDFAGQSDTFIFHTQDKRRLIIDDLCSHEFRDTSAKIKKIWGESQFLKGLMN
HHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCHHCCHHHHHHHHHCHHHHHHHHHH
EKIESSRKQDENNLVIKQMLKSLEEANLNSSEEILELESLENKLVNNLEINHSIQSCLDN
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LNNFSHDEPSVAFLINQSIKNLNRTSDFDLKIQKFRDKLLDIQTYVEDLIFALNSYIQDI
HHCCCCCCCCEEHEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNHESNLSEIQQRLFFLKNLERTFSLALPQLIEKRDQLRTHFLKNDKDNEIRNIENQIEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LQSKLNSLFLNQSSERKKVAKQLQDSVISILRNLGLENANFSIQFSECKPSGDGIDNINF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEE
LFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKKPNTFFLDEIDNGLSGKSLFSLVEL
EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHH
IKEISKGQQVLCITHQPFLAARGLAHFKVNKNVMDGITYTSISKLTTKKQRQHELIELIG
HHHHCCCCEEEEEECCCHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GASAEVNDYASRLLDQAAA
CCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIQLKIKNIALIEIIEINFEKGLNIITGDSGSGKSLVLDSLNVLFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCEEHHCCHHHHCCCCCCCHHHHCCCC
KDHCAIEAKFSSSFHINNWLISNGFQSSSSVLNIKRISYRKNNKVLSKYSLNNLSINKKS
CCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEHHHHCCCCCCEEHEECCCCCCCCHHH
LEELGGLLIDFAGQSDTFIFHTQDKRRLIIDDLCSHEFRDTSAKIKKIWGESQFLKGLMN
HHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCHHCCHHHHHHHHHCHHHHHHHHHH
EKIESSRKQDENNLVIKQMLKSLEEANLNSSEEILELESLENKLVNNLEINHSIQSCLDN
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LNNFSHDEPSVAFLINQSIKNLNRTSDFDLKIQKFRDKLLDIQTYVEDLIFALNSYIQDI
HHCCCCCCCCEEHEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNHESNLSEIQQRLFFLKNLERTFSLALPQLIEKRDQLRTHFLKNDKDNEIRNIENQIEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LQSKLNSLFLNQSSERKKVAKQLQDSVISILRNLGLENANFSIQFSECKPSGDGIDNINF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEE
LFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKKPNTFFLDEIDNGLSGKSLFSLVEL
EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHH
IKEISKGQQVLCITHQPFLAARGLAHFKVNKNVMDGITYTSISKLTTKKQRQHELIELIG
HHHHCCCCEEEEEECCCHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GASAEVNDYASRLLDQAAA
CCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]