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The map label for this gene is ynbB [H]

Identifier: 78780147

GI number: 78780147

Start: 1653991

End: 1655283

Strand: Reverse

Name: ynbB [H]

Synonym: PMT9312_1762

Alternate gene names: 78780147

Gene position: 1655283-1653991 (Counterclockwise)

Preceding gene: 78780148

Following gene: 78780146

Centisome position: 96.85

GC content: 33.1

Gene sequence:

>1293_bases
ATGACACTAAACAATAACTTAAAATTGGCTGAAAATGCTGTTCTTTCTGTAGAAGAGGGTTTAAGTAAAGTTTTTCAAGA
AAGATCCAATCAGGTTTTCCAGAAATTAGATAATATTTTGACAATTTTTAAGGAAGAAAAAGTTTCTACTAGTCATTTCA
ATCAATCCTCTGGTAGTGGTCATGATGATATATCTAGAGAAAAAATTGATGCGGTTTTTGCAAGATTTTTTCTTGCTGAA
AAGGCAGCTGTGAGAATGCAATTTGTAAGTGGAACGCATGCAATAAGTTCCGTCTTATTTGGAATTCTTAGACCTGGAGA
TGTGATGTTATCTCTTACAGGACAACCGTATGACACATTAGAAGAAGTGATAGGAATAAGGGGAGGAGGTAAAGGCTCAC
TTAAAGATTTTGAGATTGAATATAAGCAAATAAATATCTGCGAGAATTTTGATTCTTTTGAAGAAAAAATTGTTCATTCT
TTTAAAGAAAATTCATGCAAATTAGTATTCATACAAAAAAGTTGTGGATATAGTTGGAGAAAATCTCTTACTAATCATCA
GATAGAGAAAATTTGTAGTCTGATTCATTCTCTTGATCCTAACTGCATATGTTTTGTTGATAACTGTTATGGAGAGCTTG
TTGAAGATAGTGAACCTATTTCTAAAGGGGCAAATATCATTGCTGGATCATTGATTAAAAATTTGGGAGGGACAATCGTT
CCTACTGGTGGGTACATTGCAGGAGATGCAGAGTTGGTTGAGATGGCCTGTTCTAGGTTGACTTCACCAGGTATTGGTTC
ATCAGCAGGAATAAATTTTGGCCTAGGAAGATTAATTTTGCAGGGTTTGTTTTTAGCACCACAAATTGTTCATGAATCAC
TAAAAGGTGCTGATATGGTTGCCTCAGTTTTTAAAAATTTGGGATTTAAGGTTTTGCCAGAGCCAGCAAATTATAGATCT
GATCTTATTCAAGCAGTGAGATTGAATAATCCTGATTTGGTACAAAAAGTTTGTCAATCTTTTCAAAATTCTTCACCAGT
AGATTCTTTTTTAAATGTTGTTCCATCACCAATGGAAGGATATGATTCAAAATTATTAATGGCAGGAGGTACATTTATTG
AAGGTAGTACAAGTGAATTTTCCGCTGATGCTCCTCTAAGAGATCCTTACAATATTTTTGTTCAAGGTGGTTCTCACATA
GCTCATATCAAAATTGCATTAATTCAATTATTATCTGAATTATTAGAGGAAAAATTAATTTCAAAGGATTCTCTACTTTC
TTTATCAACTTAA

Upstream 100 bases:

>100_bases
TTCAAAAAAACTCTCCTATTTTCAGGGCAGAGGACCTAATGCTTTCCTCGCAGAATTAAGAAATTTAGCTTCTGAAAAAT
CACATGAGTTTTCATAATTA

Downstream 100 bases:

>100_bases
TCATGTCTTACCAGTTTCCAGACAACCTCAACTATGCTGATACCCATGAATATGTCTTAGAAGAAGAAGGATTGTTAAAA
ATTGGAGTTAGTGAATTTGC

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTLNNNLKLAENAVLSVEEGLSKVFQERSNQVFQKLDNILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARFFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFEIEYKQINICENFDSFEEKIVHS
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYIAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVASVFKNLGFKVLPEPANYRS
DLIQAVRLNNPDLVQKVCQSFQNSSPVDSFLNVVPSPMEGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHI
AHIKIALIQLLSELLEEKLISKDSLLSLST

Sequences:

>Translated_430_residues
MTLNNNLKLAENAVLSVEEGLSKVFQERSNQVFQKLDNILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARFFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFEIEYKQINICENFDSFEEKIVHS
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYIAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVASVFKNLGFKVLPEPANYRS
DLIQAVRLNNPDLVQKVCQSFQNSSPVDSFLNVVPSPMEGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHI
AHIKIALIQLLSELLEEKLISKDSLLSLST
>Mature_429_residues
TLNNNLKLAENAVLSVEEGLSKVFQERSNQVFQKLDNILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARFFLAEK
AAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFEIEYKQINICENFDSFEEKIVHSF
KENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIVP
TGGYIAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVASVFKNLGFKVLPEPANYRSD
LIQAVRLNNPDLVQKVCQSFQNSSPVDSFLNVVPSPMEGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIA
HIKIALIQLLSELLEEKLISKDSLLSLST

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46929; Mature: 46798

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNNNLKLAENAVLSVEEGLSKVFQERSNQVFQKLDNILTIFKEEKVSTSHFNQSSGSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARFFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGGGKGSLKDFEIEYKQINICENFDSFEEKIVHSFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCEEEEHHEEEHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYIAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ASVFKNLGFKVLPEPANYRSDLIQAVRLNNPDLVQKVCQSFQNSSPVDSFLNVVPSPMEG
HHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIAHIKIALIQLLSELLEEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
SKDSLLSLST
CCCCCCCCCC
>Mature Secondary Structure 
TLNNNLKLAENAVLSVEEGLSKVFQERSNQVFQKLDNILTIFKEEKVSTSHFNQSSGSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARFFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGGGKGSLKDFEIEYKQINICENFDSFEEKIVHSFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCEEEEHHEEEHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYIAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ASVFKNLGFKVLPEPANYRSDLIQAVRLNNPDLVQKVCQSFQNSSPVDSFLNVVPSPMEG
HHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIAHIKIALIQLLSELLEEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
SKDSLLSLST
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]